Os03g0607700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os03g0607700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.71 | 0.419 | 10.7 | 0.504 | 0.37 | 0.72 | -1.17 | 1.5 | -0.00918 | 1.8 | 16.3 | 4342 | -- | -- |
| 81.48 | 0.42 | 10.7 | 0.21 | 0.361 | 0.618 | -1.04 | -- | -0.0502 | 1.02 | 21.49 | 5781 | -- | -- |
| 83.52 | 0.429 | 10.7 | 0.671 | 0.679 | 0.721 | -- | 2.24 | 0.00878 | 2.6 | 16.74 | 4483 | -- | -- |
| 85.31 | 0.43 | 10.7 | 0.292 | 0.403 | 0.54 | -- | -- | -0.0336 | 2.61 | 24.41 | 5822 | -- | -- |
| 93.24 | 0.45 | 10.6 | 0.514 | -- | 0.851 | -- | 1.71 | 0.0176 | -- | 15.25 | 4165 | -- | -- |
| 91.38 | 0.448 | 10.7 | 0.458 | 0.41 | -- | -1.12 | -- | 0.0294 | 1.91 | -- | -- | -- | -- |
| 95.84 | 0.458 | 10.7 | 0.491 | 0.424 | -- | -- | -- | 0.0346 | 2.68 | -- | -- | -- | -- |
| 93.86 | 0.451 | 10.7 | 0.27 | -- | 0.598 | -- | -- | -0.0376 | -- | 24.01 | 5584 | -- | -- |
| 86.98 | 0.434 | 10.7 | -- | 0.394 | 0.625 | -- | -- | -0.0915 | 2.66 | 23.71 | 5822 | -- | -- |
| 106.32 | 0.482 | 10.7 | 0.509 | -- | -- | -- | -- | 0.0453 | -- | -- | -- | -- | -- |
| 102.19 | 0.473 | 10.7 | -- | 0.434 | -- | -- | -- | -0.0201 | 2.7 | -- | -- | -- | -- |
| 94.88 | 0.454 | 10.7 | -- | -- | 0.742 | -- | -- | -0.138 | -- | 19.2 | 5477 | -- | -- |
| 113.15 | 0.496 | 10.7 | -- | -- | -- | -- | -- | -0.0111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.53 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 34 | 72.27 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 35 | 72.28 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 36 | 72.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 50 | 72.71 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 55 | 72.88 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 58 | 72.92 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 5 |
| 61 | 72.95 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 7 |
| 69 | 73.01 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 76 | 73.05 | radiation | 30.0 | 30 | < th | dose independent | rect. | 3 | 8 |
| 83 | 73.17 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 88 | 73.21 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 15 |
| 91 | 73.24 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 10 |
| 94 | 73.26 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 96 | 73.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 8 |
| 112 | 73.46 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 11 | 16 |
| 121 | 73.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 123 | 73.58 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 177 | 73.98 | temperature | 10.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 193 | 74.12 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 194 | 74.12 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 198 | 74.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 222 | 74.29 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 227 | 74.31 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 288 | 74.68 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 7 |
| 323 | 74.90 | wind | 7.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 324 | 74.90 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 326 | 74.90 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 334 | 74.94 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 335 | 74.94 | radiation | 30.0 | 10 | < th | dose independent | rect. | 14 | 21 |
| 337 | 74.94 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 340 | 74.95 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 358 | 75.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 360 | 75.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 363 | 75.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 364 | 75.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 365 | 75.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 392 | 75.11 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 402 | 75.16 | temperature | 15.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 407 | 75.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 408 | 75.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 419 | 75.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 422 | 75.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 423 | 75.26 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 425 | 75.26 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 453 | 75.34 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 17 |
| 458 | 75.36 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 460 | 75.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 461 | 75.36 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 21 |
| 477 | 75.42 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 16 |
| 480 | 75.42 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 493 | 75.46 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 506 | 75.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 8 |
| 508 | 75.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 509 | 75.51 | temperature | 15.0 | 10 | > th | dose independent | rect. | 11 | 16 |
| 516 | 75.53 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 517 | 75.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 8 |
| 518 | 75.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 521 | 75.54 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 522 | 75.54 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 526 | 75.54 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 531 | 75.54 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 533 | 75.54 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 535 | 75.54 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 572 | 75.60 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 573 | 75.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 576 | 75.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 8 |
| 577 | 75.60 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 578 | 75.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 595 | 75.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 609 | 75.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 3 |
| 621 | 75.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 646 | 75.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 649 | 75.71 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 653 | 75.71 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 659 | 75.71 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 660 | 75.71 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 672 | 75.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 693 | 75.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 5 |
| 695 | 75.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 696 | 75.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 697 | 75.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 698 | 75.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 701 | 75.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 709 | 75.77 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 736 | 75.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 737 | 75.87 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 742 | 75.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 746 | 75.88 | temperature | 30.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 749 | 75.89 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 762 | 75.93 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 775 | 75.95 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 784 | 75.97 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 805 | 76.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 815 | 76.06 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 819 | 76.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 21 |
| 820 | 76.07 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 830 | 76.08 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 8 |
| 832 | 76.08 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 8 |
| 882 | 76.19 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 888 | 76.20 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 901 | 76.23 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 940 | 76.31 | radiation | 30.0 | 30 | < th | dose independent | rect. | 17 | 18 |
| 945 | 76.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 15 |
| 963 | 76.35 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 8 |
| 969 | 76.35 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 8 |
| 971 | 76.35 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 8 |
| 993 | 76.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 996 | 76.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 998 | 76.38 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 13 | 20 |