Os03g0594700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0594700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.74 | 0.457 | 8.6 | 0.704 | 0.336 | 0.863 | 0.37 | 0.368 | 0.227 | 10.2 | 20.1 | 1065 | -- | -- |
| 94.96 | 0.454 | 8.61 | 0.656 | 0.348 | 0.782 | 0.31 | -- | 0.222 | 10.2 | 20.3 | 1053 | -- | -- |
| 95.24 | 0.455 | 8.6 | 0.699 | 0.342 | 0.834 | -- | 0.22 | 0.221 | 10.1 | 20.2 | 1061 | -- | -- |
| 95.12 | 0.454 | 8.61 | 0.663 | 0.33 | 0.781 | -- | -- | 0.209 | 10.1 | 20.5 | 1065 | -- | -- |
| 100.85 | 0.468 | 8.6 | 0.72 | -- | 0.829 | -- | 0.356 | 0.231 | -- | 20.3 | 1264 | -- | -- |
| 110.51 | 0.493 | 8.57 | 0.967 | 0.255 | -- | 0.319 | -- | 0.385 | 9.66 | -- | -- | -- | -- |
| 110.88 | 0.493 | 8.57 | 0.979 | 0.255 | -- | -- | -- | 0.385 | 9.41 | -- | -- | -- | -- |
| 99.88 | 0.465 | 8.63 | 0.529 | -- | 0.839 | -- | -- | 0.183 | -- | 19.7 | 2614 | -- | -- |
| 99.88 | 0.465 | 8.63 | -- | 0.305 | 1.23 | -- | -- | 0.0919 | 10 | 19 | 2517 | -- | -- |
| 114.7 | 0.5 | 8.58 | 0.977 | -- | -- | -- | -- | 0.386 | -- | -- | -- | -- | -- |
| 136.13 | 0.546 | 8.59 | -- | 0.255 | -- | -- | -- | 0.276 | 9.12 | -- | -- | -- | -- |
| 105.08 | 0.477 | 8.64 | -- | -- | 1.22 | -- | -- | 0.0894 | -- | 19.11 | 2602 | -- | -- |
| 139.89 | 0.552 | 8.6 | -- | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.94 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 3 |
| 2 | 93.38 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 6 |
| 7 | 93.92 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 10 | 94.03 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 12 | 94.15 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 8 |
| 25 | 94.73 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 27 | 94.74 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 30 | 94.83 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 34 | 94.90 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 35 | 94.90 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 46 | 95.05 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 16 |
| 75 | 95.23 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 18 |
| 85 | 95.28 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 21 |
| 123 | 95.46 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 13 |
| 124 | 95.46 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 126 | 95.48 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 12 |
| 166 | 95.68 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 21 |
| 167 | 95.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 189 | 95.77 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 10 |
| 230 | 95.86 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 260 | 95.93 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 23 |
| 264 | 95.94 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 21 |
| 283 | 95.98 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 23 |
| 287 | 95.99 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 19 |
| 297 | 96.01 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 21 |
| 304 | 96.03 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 10 |
| 323 | 96.08 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 357 | 96.14 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 22 |
| 383 | 96.18 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 23 |
| 469 | 96.31 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 508 | 96.35 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 554 | 96.42 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 19 |
| 561 | 96.43 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 643 | 96.53 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 17 |
| 665 | 96.56 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 6 |
| 788 | 96.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 869 | 96.87 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 871 | 96.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 886 | 96.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 987 | 97.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 10 |