Os03g0588600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Frigida-like family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0588600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Frigida-like family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 268.48 | 0.77 | 2.32 | 1.44 | 0.144 | -83.2 | 1.12 | 214 | -0.0192 | 6.09 | 46 | 175 | -- | -- |
| 290.66 | 0.794 | 2.82 | 0.249 | 0.0529 | 1.28 | 0.208 | -- | -0.0391 | 10.6 | 51.04 | 220 | -- | -- |
| 267.49 | 0.762 | 2.23 | 1.65 | 0.0374 | -78.1 | -- | 202 | 0.0427 | 15.1 | 44 | 145 | -- | -- |
| 279.26 | 0.778 | 2.81 | 0.231 | 0.091 | 3.34 | -- | -- | 0.0183 | 6.67 | 47 | 175 | -- | -- |
| 266.05 | 0.76 | 2.1 | 2.09 | -- | -79 | -- | 205 | -0.0266 | -- | 43.15 | 142 | -- | -- |
| 294.34 | 0.804 | 2.82 | 0.314 | 0.0938 | -- | 0.55 | -- | -0.0284 | 7.04 | -- | -- | -- | -- |
| 295.08 | 0.804 | 2.82 | 0.325 | 0.0982 | -- | -- | -- | -0.0291 | 8.22 | -- | -- | -- | -- |
| 279.94 | 0.779 | 2.83 | 0.201 | -- | 3.24 | -- | -- | -0.0211 | -- | 46.56 | 174 | -- | -- |
| 279.86 | 0.779 | 2.82 | -- | 0.137 | 3.45 | -- | -- | -0.041 | 6.15 | 46 | 175 | -- | -- |
| 295.61 | 0.803 | 2.82 | 0.326 | -- | -- | -- | -- | -0.0279 | -- | -- | -- | -- | -- |
| 297.87 | 0.807 | 2.83 | -- | 0.1 | -- | -- | -- | -0.0653 | 7.98 | -- | -- | -- | -- |
| 280.83 | 0.78 | 2.82 | -- | -- | 3.39 | -- | -- | -0.0389 | -- | 46 | 175 | -- | -- |
| 298.42 | 0.806 | 2.83 | -- | -- | -- | -- | -- | -0.0641 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 261.85 | humidity | 50 | 90 | < th | dose independent | rect. | 15 | 2 |
| 37 | 261.92 | humidity | 50 | 90 | < th | dose dependent | rect. | 15 | 2 |
| 154 | 262.13 | wind | 1 | 30 | < th | dose independent | rect. | 15 | 1 |
| 159 | 262.13 | wind | 1 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 213 | 262.98 | humidity | 50 | 90 | < th | dose dependent | sin | 12 | NA |
| 214 | 264.01 | humidity | 50 | 90 | < th | dose independent | sin | 12 | NA |
| 222 | 266.27 | humidity | 50 | 90 | > th | dose independent | sin | 12 | NA |
| 224 | 267.80 | wind | 7 | 90 | > th | dose independent | rect. | 1 | 8 |
| 225 | 267.82 | wind | 7 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 226 | 267.83 | wind | 7 | 90 | > th | dose independent | rect. | 3 | 6 |
| 232 | 267.88 | wind | 7 | 90 | > th | dose independent | rect. | 7 | 2 |
| 235 | 267.89 | wind | 7 | 90 | > th | dose dependent | rect. | 7 | 2 |
| 284 | 271.11 | temperature | 30 | 30 | > th | dose independent | rect. | 14 | 2 |
| 413 | 273.99 | temperature | 20 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 415 | 274.00 | temperature | 20 | 10 | < th | dose independent | rect. | 12 | 2 |
| 454 | 274.27 | radiation | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 481 | 274.27 | radiation | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 514 | 274.51 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 595 | 275.31 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 603 | 275.58 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 609 | 275.58 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 676 | 275.82 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 685 | 276.02 | humidity | 50 | 270 | < th | dose dependent | sin | 7 | NA |
| 707 | 276.13 | atmosphere | 1010 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 720 | 276.35 | atmosphere | 1010 | 720 | > th | dose dependent | rect. | 1 | 3 |
| 745 | 276.74 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |
| 790 | 277.29 | temperature | 30 | 90 | > th | dose independent | sin | 13 | NA |
| 847 | 277.55 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 855 | 277.61 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 857 | 277.61 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 24 | 21 |
| 858 | 277.62 | atmosphere | 1015 | 1440 | < th | dose independent | sin | 23 | NA |
| 894 | 277.87 | temperature | 30 | 90 | < th | dose independent | sin | 13 | NA |
| 898 | 277.90 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 12 | 9 |
| 918 | 278.08 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 931 | 278.16 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 935 | 278.17 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 4 | 11 |