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Os03g0568600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : DTW domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.1 (0.0267) R2 : 0.793
β1 : 1 (0.0976) R2dD : 0.0496 R2D : 0.037
β2 : 1.64 (0.0783) R2dC : 0.282 R2C : 0.539
β3 : -1.4 (0.0772) R2dE : 0.212 R2E : 0.468
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0284 (0.0572) R2dN8 : 0.000137 R2N8 : -0.00212
σ : 0.498
deviance : 114.29
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_____
C
peak time of C : 14.9
E
wheather : wind
threshold : 4.34
memory length : 252
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 1.17
open length of G : 6.05

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
112.33 0.498 7.1 0.982 1.63 -1.42 -0.863 -0.604 0.0234 14.9 4.4 263 1.05 6.1
113.09 0.495 7.09 1.04 1.6 -1.44 -0.745 -- 0.0465 14.8 4.6 250 1.16 6.13
114.28 0.498 7.1 0.99 1.64 -1.4 -- -0.164 0.0239 14.9 4.391 256 1.12 6.06
114.29 0.498 7.1 1 1.64 -1.4 -- -- 0.0284 14.9 4.34 252 1.17 6.05
197.4 0.654 7.09 1.07 -- -2.06 -- 0.27 0.104 -- 5.434 204 0.0162 7.2
152.11 0.578 7.15 0.935 2.64 -- -0.358 -- -0.0771 16.2 -- -- -- --
152.47 0.578 7.15 0.931 2.64 -- -- -- -0.079 16.2 -- -- -- --
196.94 0.654 7.08 1.01 -- -2.11 -- -- 0.0874 -- 5.344 207 0.0112 7.12
140.53 0.552 7.12 -- 1.66 -1.34 -- -- -0.0873 14.9 4.4 241 1.3 6.13
529.9 1.08 7.14 0.825 -- -- -- -- -0.149 -- -- -- -- --
175.31 0.619 7.17 -- 2.62 -- -- -- -0.183 16.2 -- -- -- --
223.89 0.697 7.09 -- -- -2.09 -- -- 0.0576 -- 5.357 202 0.00766 7.19
547.85 1.09 7.16 -- -- -- -- -- -0.241 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.16 wind 5.0 270 < th dose independent rect. 1 6
2 113.79 wind 5.0 270 < th dose independent rect. 3 2
3 114.11 wind 5.0 270 < th dose independent rect. 2 4
5 114.48 precipitation 0.1 270 < th dose independent rect. 3 2
6 114.48 precipitation 0.1 270 < th dose dependent rect. 3 2
7 114.66 wind 9.0 270 < th dose independent rect. 5 22
8 114.77 wind 9.0 90 < th dose dependent rect. 3 6
9 114.83 radiation 30.0 90 < th dose independent rect. 3 6
14 115.24 precipitation 0.1 270 < th dose independent rect. 1 6
15 115.24 precipitation 0.1 270 < th dose dependent rect. 1 6
16 115.32 radiation 20.0 270 < th dose independent rect. 1 7
19 115.34 precipitation 0.1 90 < th dose independent rect. 3 5
20 115.34 precipitation 0.1 90 < th dose dependent rect. 3 5
21 115.37 wind 9.0 270 < th dose independent rect. 7 18
22 115.46 wind 9.0 270 < th dose dependent rect. 3 2
27 115.57 radiation 40.0 270 < th dose dependent rect. 1 7
31 115.61 radiation 1.0 270 < th dose dependent rect. 3 2
32 115.65 precipitation 0.1 90 < th dose independent rect. 8 19
33 115.65 precipitation 0.1 90 < th dose dependent rect. 8 19
36 115.69 temperature 10.0 270 > th dose independent rect. 3 2
38 115.69 temperature 30.0 270 < th dose independent rect. 3 2
39 115.69 humidity 50.0 270 > th dose independent rect. 3 2
42 115.69 atmosphere 995.0 270 > th dose independent rect. 3 2
43 115.69 atmosphere 1010.0 270 < th dose independent rect. 3 2
45 115.69 radiation 20.0 270 < th dose independent rect. 3 2
48 115.69 temperature 10.0 270 > th dose independent rect. 5 22
49 115.69 wind 9.0 270 < th dose dependent rect. 1 6
50 115.72 radiation 30.0 270 < th dose dependent rect. 3 2
56 115.82 radiation 1.0 270 < th dose independent rect. 3 2
58 115.84 humidity 50.0 270 > th dose dependent rect. 21 4
62 115.90 humidity 60.0 90 > th dose independent rect. 3 6
70 116.01 temperature 30.0 90 < th dose independent rect. 3 6
74 116.04 temperature 10.0 90 > th dose independent rect. 3 5
79 116.04 atmosphere 995.0 90 > th dose independent rect. 3 5
80 116.04 atmosphere 1015.0 90 < th dose independent rect. 3 5
81 116.04 humidity 70.0 270 > th dose independent rect. 1 6
82 116.04 temperature 10.0 90 > th dose independent rect. 8 19
83 116.04 wind 9.0 270 < th dose independent rect. 6 20
88 116.11 temperature 10.0 270 > th dose independent rect. 1 6
90 116.11 temperature 30.0 270 < th dose independent rect. 1 6
91 116.11 humidity 50.0 270 > th dose independent rect. 1 6
93 116.11 atmosphere 995.0 270 > th dose independent rect. 1 6
94 116.11 atmosphere 1015.0 270 < th dose independent rect. 1 6
118 116.46 radiation 40.0 90 < th dose dependent rect. 3 6
124 116.67 humidity 50.0 270 > th dose dependent rect. 19 7
125 116.69 precipitation 0.1 270 < th dose independent rect. 6 20
126 116.69 precipitation 0.1 270 < th dose dependent rect. 6 20
131 116.76 precipitation 0.1 270 < th dose independent rect. 5 22
133 116.76 precipitation 0.1 270 < th dose dependent rect. 5 22
146 116.83 temperature 10.0 270 > th dose independent rect. 6 20
150 116.88 humidity 50.0 90 > th dose dependent rect. 3 6
156 116.98 precipitation 0.1 270 < th dose independent rect. 2 17
157 116.98 precipitation 0.1 270 < th dose dependent rect. 2 17
159 117.04 radiation 40.0 270 < th dose dependent rect. 2 4
161 117.09 humidity 60.0 270 > th dose independent rect. 19 7
162 117.09 precipitation 0.1 270 < th dose independent rect. 19 7
163 117.09 precipitation 0.1 270 < th dose dependent rect. 19 7
166 117.11 temperature 10.0 270 > th dose independent rect. 19 7
168 117.11 temperature 30.0 270 < th dose independent rect. 19 7
173 117.11 atmosphere 995.0 270 > th dose independent rect. 19 7
175 117.11 radiation 1.0 270 < th dose independent rect. 19 7
180 117.11 temperature 10.0 270 > th dose independent rect. 2 17
182 117.11 atmosphere 1015.0 270 < th dose independent rect. 2 17
184 117.11 radiation 1.0 270 < th dose dependent rect. 19 7
190 117.13 wind 9.0 270 < th dose independent rect. 19 7
193 117.19 humidity 50.0 270 > th dose dependent rect. 3 2
198 117.24 temperature 15.0 270 > th dose independent rect. 1 20
207 117.42 wind 9.0 270 < th dose independent rect. 6 9
222 117.71 atmosphere 1015.0 270 < th dose independent rect. 1 20
227 117.77 precipitation 0.1 270 < th dose independent rect. 6 9
229 117.77 precipitation 0.1 270 < th dose dependent rect. 6 9
231 117.85 temperature 10.0 270 > th dose independent rect. 21 4
232 117.85 temperature 30.0 270 < th dose independent rect. 21 4
233 117.85 humidity 50.0 270 > th dose independent rect. 21 4
236 117.85 atmosphere 995.0 270 > th dose independent rect. 21 4
237 117.85 radiation 1.0 270 < th dose independent rect. 21 4
242 117.85 temperature 10.0 270 > th dose independent rect. 6 9
243 117.85 atmosphere 1015.0 270 < th dose independent rect. 6 9
244 117.85 temperature 10.0 270 > th dose independent rect. 15 15
247 117.85 radiation 1.0 270 < th dose dependent rect. 21 4
264 117.86 wind 9.0 270 < th dose independent rect. 21 4
265 117.86 radiation 40.0 270 < th dose independent rect. 15 15
268 117.91 precipitation 0.1 270 < th dose independent rect. 21 4
269 117.91 precipitation 0.1 270 < th dose dependent rect. 21 4
282 118.04 atmosphere 995.0 270 > th dose independent rect. 6 9
337 118.29 precipitation 0.1 270 < th dose independent rect. 1 20
338 118.29 precipitation 0.1 270 < th dose dependent rect. 1 20
339 118.30 atmosphere 1000.0 30 > th dose independent rect. 22 6
384 118.44 wind 9.0 270 < th dose independent rect. 2 17
405 118.55 humidity 50.0 270 > th dose dependent rect. 1 6
412 118.60 atmosphere 995.0 270 > th dose independent rect. 7 18
415 118.62 humidity 50.0 270 > th dose dependent rect. 2 4
454 118.81 radiation 40.0 90 < th dose dependent rect. 3 8
455 118.82 precipitation 0.1 270 < th dose independent rect. 15 15
457 118.82 precipitation 0.1 270 < th dose dependent rect. 15 15
462 118.88 wind 9.0 270 < th dose independent rect. 15 15
476 119.01 temperature 10.0 270 > th dose dependent rect. 3 2
520 119.16 radiation 1.0 270 < th dose dependent rect. 3 15
523 119.18 radiation 30.0 90 < th dose independent rect. 3 8
546 119.26 radiation 1.0 270 < th dose independent rect. 2 17
547 119.29 atmosphere 995.0 90 > th dose dependent rect. 3 5
551 119.34 wind 9.0 270 < th dose independent rect. 1 20
562 119.42 temperature 10.0 90 > th dose dependent rect. 3 5
575 119.51 radiation 1.0 270 < th dose dependent rect. 2 17
580 119.55 wind 9.0 270 < th dose dependent rect. 7 18
581 119.57 atmosphere 995.0 270 > th dose independent rect. 6 20
607 119.60 humidity 50.0 90 > th dose dependent rect. 3 8
616 119.66 wind 9.0 90 < th dose dependent rect. 21 6
674 119.80 precipitation 0.1 10 < th dose independent rect. 4 18
675 119.80 precipitation 0.1 10 < th dose dependent rect. 4 18
678 119.83 radiation 1.0 270 < th dose dependent rect. 3 9
713 120.05 temperature 10.0 270 > th dose dependent rect. 1 6
783 120.27 wind 1.0 270 > th dose independent rect. 1 6
795 120.33 radiation 1.0 270 < th dose independent rect. 2 10
821 120.40 atmosphere 995.0 270 > th dose dependent rect. 21 4
842 120.48 atmosphere 995.0 270 > th dose dependent rect. 3 2
855 120.53 atmosphere 995.0 270 > th dose independent rect. 2 17
860 120.56 temperature 30.0 270 < th dose dependent rect. 3 2
870 120.60 atmosphere 1005.0 90 > th dose independent rect. 3 5
945 120.89 wind 1.0 270 > th dose independent rect. 2 4
950 120.92 atmosphere 995.0 270 > th dose independent rect. 1 19
981 121.10 wind 1.0 270 > th dose independent rect. 3 1
995 121.18 radiation 40.0 90 < th dose independent rect. 3 18