Os03g0427000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0427000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.64 | 0.238 | 11.6 | 0.535 | 0.514 | -0.664 | 0.154 | 0.677 | -0.0749 | 1.56 | 26.31 | 5926 | -- | -- |
| 26.01 | 0.238 | 11.6 | 0.379 | 0.527 | -0.548 | 0.22 | -- | -0.0297 | 1.54 | 26.22 | 7252 | -- | -- |
| 25.71 | 0.236 | 11.6 | 0.528 | 0.516 | -0.655 | -- | 0.71 | -0.085 | 1.61 | 26.66 | 5913 | -- | -- |
| 25.99 | 0.237 | 11.6 | 0.339 | 0.531 | -0.571 | -- | -- | -0.0233 | 1.69 | 26.16 | 7269 | -- | -- |
| 40.63 | 0.298 | 11.6 | 0.448 | -- | -1.05 | -- | 2.48 | -0.114 | -- | 26.66 | 5913 | -- | -- |
| 40.75 | 0.299 | 11.6 | 0.121 | 0.508 | -- | 0.0564 | -- | -0.179 | 1.56 | -- | -- | -- | -- |
| 40.76 | 0.299 | 11.6 | 0.119 | 0.508 | -- | -- | -- | -0.18 | 1.56 | -- | -- | -- | -- |
| 41.13 | 0.3 | 11.6 | 0.245 | -- | -0.85 | -- | -- | -0.146 | -- | 26.16 | 7269 | -- | -- |
| 28.67 | 0.249 | 11.6 | -- | 0.519 | -0.485 | -- | -- | -0.0798 | 1.56 | 26.99 | 7249 | -- | -- |
| 56.53 | 0.351 | 11.6 | 0.139 | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
| 41.13 | 0.3 | 11.6 | -- | 0.51 | -- | -- | -- | -0.193 | 1.57 | -- | -- | -- | -- |
| 42.69 | 0.305 | 11.6 | -- | -- | -0.813 | -- | -- | -0.174 | -- | 26.16 | 7269 | -- | -- |
| 57.04 | 0.353 | 11.6 | -- | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 4 | 25.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 14 | 25.04 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 68 | 25.22 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 71 | 25.28 | temperature | 30.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 72 | 25.28 | temperature | 30.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 161 | 25.74 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 171 | 25.82 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 14 |
| 250 | 25.90 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 251 | 25.91 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 252 | 25.91 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 260 | 25.95 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 275 | 25.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 311 | 26.02 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 312 | 26.02 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 355 | 26.09 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 16 |
| 356 | 26.09 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 19 |
| 363 | 26.10 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 422 | 26.14 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 508 | 26.24 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 623 | 26.26 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 624 | 26.26 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 725 | 26.26 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 792 | 26.32 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 812 | 26.36 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 835 | 26.41 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 906 | 26.51 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 923 | 26.55 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 935 | 26.57 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 937 | 26.57 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 940 | 26.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 942 | 26.59 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 948 | 26.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 967 | 26.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 980 | 26.62 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 986 | 26.63 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 12 |
| 997 | 26.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 18 | 2 |