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Os03g0425800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MYBY2 protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.91 (0.0161) R2 : 0.491
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.846 (0.0408) R2dC : 0.483 R2C : 0.479
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.1 (0.0339) R2dN8 : 0.0126 R2N8 : 0.00814
σ : 0.304
deviance : 42.16
__
_____
C
peak time of C : 8.37
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.93 0.261 9.91 0.296 0.669 -0.376 -0.529 -0.937 0.131 6.31 0.8914 23 -- --
35.06 0.278 9.93 0.255 0.63 -0.595 -0.952 -- 0.115 4.35 0.8914 23 -- --
31.56 0.262 9.91 0.293 0.678 -0.38 -- -0.881 0.13 6.3 0.9247 33 -- --
35.58 0.278 9.92 0.268 0.636 -0.409 -- -- 0.126 6.14 0.04 13 -- --
52.39 0.339 9.92 0.307 -- -0.453 -- -0.791 0.143 -- 0.9247 33 -- --
38.45 0.291 9.9 0.288 0.84 -- 0.648 -- 0.136 8.61 -- -- -- --
39.68 0.295 9.9 0.307 0.845 -- -- -- 0.134 8.39 -- -- -- --
54.48 0.344 9.93 0.285 -- -0.465 -- -- 0.114 -- 0.12 3 -- --
37.44 0.285 9.91 -- 0.633 -0.417 -- -- 0.115 6.04 0.02 13 -- --
79.41 0.416 9.93 0.312 -- -- -- -- 0.143 -- -- -- -- --
42.16 0.304 9.91 -- 0.846 -- -- -- 0.1 8.37 -- -- -- --
56.68 0.351 9.94 -- -- -0.482 -- -- 0.0998 -- 0.12 3 -- --
81.97 0.423 9.93 -- -- -- -- -- 0.108 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.78 temperature 10.0 720 > th dose dependent rect. 3 4
7 26.12 temperature 30.0 270 < th dose dependent rect. 7 7
12 26.33 temperature 30.0 720 < th dose dependent rect. 1 9
16 26.48 temperature 25.0 270 < th dose independent rect. 9 2
19 26.54 temperature 25.0 270 < th dose independent rect. 7 6
30 26.78 temperature 30.0 720 < th dose dependent rect. 7 2
66 27.32 temperature 30.0 270 < th dose dependent rect. 9 1
72 27.38 temperature 10.0 720 > th dose dependent rect. 23 8
86 27.47 temperature 30.0 270 < th dose independent rect. 8 17
116 27.70 temperature 10.0 270 > th dose dependent rect. 3 14
134 27.86 radiation 40.0 90 < th dose independent rect. 3 8
137 27.88 atmosphere 995.0 90 > th dose independent rect. 9 18
138 27.88 temperature 30.0 720 < th dose dependent sin 6 NA
163 28.07 radiation 30.0 270 < th dose independent rect. 1 7
181 28.20 humidity 70.0 270 > th dose independent rect. 1 7
192 28.22 temperature 10.0 720 > th dose dependent rect. 21 11
198 28.24 precipitation 0.1 270 < th dose independent rect. 3 14
199 28.24 precipitation 0.1 270 < th dose dependent rect. 3 14
201 28.26 precipitation 0.1 270 < th dose independent rect. 1 7
202 28.26 precipitation 0.1 270 < th dose dependent rect. 1 7
204 28.27 wind 9.0 270 < th dose independent rect. 3 14
209 28.31 radiation 40.0 90 < th dose independent rect. 3 6
214 28.33 wind 7.0 270 < th dose independent rect. 1 7
215 28.33 atmosphere 995.0 270 > th dose independent rect. 6 21
222 28.36 temperature 10.0 270 > th dose independent rect. 1 7
224 28.36 temperature 30.0 270 < th dose independent rect. 1 7
225 28.36 humidity 50.0 270 > th dose independent rect. 1 7
227 28.36 atmosphere 995.0 270 > th dose independent rect. 1 7
228 28.36 atmosphere 1015.0 270 < th dose independent rect. 1 7
229 28.36 temperature 10.0 270 > th dose independent rect. 8 17
234 28.39 precipitation 0.1 90 < th dose independent rect. 3 6
235 28.39 precipitation 0.1 90 < th dose dependent rect. 3 6
236 28.40 temperature 15.0 270 > th dose independent rect. 3 14
237 28.40 temperature 30.0 30 < th dose independent rect. 11 16
244 28.41 atmosphere 995.0 30 > th dose dependent rect. 11 16
245 28.42 humidity 60.0 90 > th dose independent rect. 3 6
246 28.42 humidity 60.0 90 > th dose independent rect. 3 8
250 28.44 temperature 20.0 720 < th dose independent rect. 2 6
254 28.45 temperature 20.0 720 < th dose independent rect. 3 4
255 28.45 precipitation 0.1 270 < th dose independent rect. 8 17
256 28.45 wind 9.0 90 < th dose dependent rect. 3 8
259 28.45 temperature 10.0 720 > th dose dependent rect. 20 13
260 28.45 precipitation 0.1 270 < th dose dependent rect. 8 17
261 28.46 temperature 30.0 90 < th dose independent rect. 3 6
268 28.49 wind 7.0 90 < th dose independent rect. 3 6
270 28.49 temperature 10.0 90 > th dose independent rect. 3 6
273 28.49 atmosphere 995.0 90 > th dose independent rect. 3 6
274 28.49 atmosphere 1015.0 90 < th dose independent rect. 3 6
280 28.50 wind 9.0 90 < th dose dependent rect. 3 6
284 28.51 radiation 20.0 30 < th dose dependent sin 12 NA
286 28.51 radiation 30.0 270 < th dose dependent rect. 16 11
290 28.52 atmosphere 995.0 90 > th dose dependent rect. 9 18
299 28.54 wind 1.0 270 > th dose independent rect. 8 17
313 28.57 radiation 10.0 270 < th dose independent rect. 16 11
327 28.60 precipitation 0.1 270 < th dose independent rect. 3 3
340 28.60 precipitation 0.1 270 < th dose dependent rect. 3 3
353 28.62 atmosphere 995.0 270 > th dose independent rect. 17 10
355 28.62 wind 9.0 270 < th dose independent rect. 13 18
375 28.68 radiation 40.0 270 < th dose dependent rect. 1 7
383 28.70 wind 7.0 270 < th dose independent rect. 3 3
398 28.73 temperature 10.0 270 > th dose independent rect. 3 3
400 28.73 temperature 30.0 270 < th dose independent rect. 3 3
401 28.73 humidity 50.0 270 > th dose independent rect. 3 3
404 28.73 atmosphere 995.0 270 > th dose independent rect. 3 3
405 28.73 atmosphere 1015.0 270 < th dose independent rect. 3 3
406 28.73 radiation 20.0 270 < th dose independent rect. 3 3
410 28.73 temperature 10.0 270 > th dose independent rect. 17 10
414 28.73 precipitation 0.1 270 < th dose independent rect. 17 10
416 28.73 atmosphere 1015.0 270 < th dose independent rect. 3 14
417 28.73 atmosphere 995.0 30 > th dose independent rect. 11 16
418 28.73 temperature 10.0 270 > th dose independent rect. 6 21
420 28.73 precipitation 0.1 270 < th dose dependent rect. 17 10
423 28.75 radiation 1.0 30 < th dose independent sin 12 NA
424 28.75 wind 9.0 270 < th dose independent rect. 17 10
432 28.77 radiation 40.0 270 < th dose dependent rect. 3 3
434 28.78 wind 9.0 270 < th dose dependent rect. 1 7
455 28.82 atmosphere 1015.0 270 < th dose independent rect. 8 17
462 28.84 radiation 40.0 270 < th dose dependent rect. 2 5
468 28.86 wind 5.0 30 < th dose independent rect. 3 8
469 28.86 precipitation 0.1 270 < th dose independent rect. 6 21
471 28.86 precipitation 0.1 270 < th dose dependent rect. 6 21
475 28.87 humidity 50.0 270 > th dose dependent rect. 3 3
481 28.88 precipitation 0.1 270 < th dose independent rect. 13 18
483 28.88 wind 9.0 270 < th dose independent rect. 12 20
484 28.88 humidity 50.0 270 > th dose dependent rect. 2 5
485 28.88 humidity 50.0 270 > th dose dependent rect. 1 7
486 28.88 precipitation 0.1 270 < th dose dependent rect. 13 18
488 28.89 wind 9.0 270 < th dose dependent rect. 3 3
496 28.90 temperature 10.0 270 > th dose independent rect. 7 6
501 28.90 atmosphere 995.0 270 > th dose independent rect. 7 6
503 28.90 atmosphere 1015.0 270 < th dose independent rect. 7 6
506 28.90 temperature 10.0 270 > th dose independent rect. 13 18
523 28.93 precipitation 0.1 270 < th dose independent rect. 7 6
529 28.93 precipitation 0.1 270 < th dose dependent rect. 7 6
548 28.97 wind 1.0 270 > th dose independent rect. 7 6
555 28.99 wind 9.0 270 < th dose independent rect. 8 17
592 29.03 humidity 50.0 270 > th dose independent rect. 7 6
594 29.03 humidity 50.0 270 > th dose independent rect. 17 10
604 29.05 humidity 50.0 90 > th dose independent rect. 9 18
622 29.09 temperature 10.0 720 > th dose dependent sin 7 NA
654 29.15 precipitation 0.1 30 < th dose independent rect. 3 8
660 29.15 precipitation 0.1 30 < th dose dependent rect. 3 8
676 29.18 temperature 30.0 10 < th dose independent rect. 11 3
678 29.18 temperature 10.0 1440 > th dose independent rect. 4 8
681 29.18 atmosphere 995.0 1440 > th dose independent rect. 4 8
682 29.18 temperature 10.0 1440 > th dose independent rect. 12 16
696 29.19 precipitation 0.1 270 < th dose independent rect. 12 20
702 29.19 precipitation 0.1 270 < th dose dependent rect. 12 20
704 29.20 temperature 20.0 720 > th dose independent rect. 4 11
713 29.21 temperature 10.0 270 > th dose independent rect. 8 4
714 29.21 atmosphere 995.0 270 > th dose independent rect. 8 4
715 29.21 atmosphere 1015.0 270 < th dose independent rect. 8 4
717 29.21 temperature 10.0 270 > th dose independent rect. 12 20
719 29.22 wind 1.0 270 > th dose independent rect. 8 4
729 29.23 wind 9.0 270 < th dose independent rect. 7 6
737 29.24 precipitation 0.1 270 < th dose independent rect. 8 4
738 29.24 temperature 30.0 30 < th dose independent rect. 3 8
739 29.24 precipitation 0.1 270 < th dose dependent rect. 8 4
768 29.28 temperature 10.0 90 > th dose dependent rect. 4 18
773 29.29 temperature 10.0 30 > th dose independent rect. 3 8
776 29.29 atmosphere 995.0 30 > th dose independent rect. 3 8
777 29.29 atmosphere 1015.0 30 < th dose independent rect. 3 8
778 29.29 temperature 10.0 30 > th dose independent rect. 11 16
799 29.32 humidity 50.0 270 > th dose independent rect. 8 4
802 29.32 precipitation 0.1 30 < th dose independent rect. 11 16
807 29.32 precipitation 0.1 30 < th dose dependent rect. 11 16
850 29.38 temperature 10.0 30 > th dose dependent rect. 3 8
875 29.42 temperature 30.0 10 < th dose independent rect. 9 7
917 29.45 wind 9.0 270 < th dose independent rect. 8 4
948 29.47 wind 1.0 270 > th dose independent rect. 1 6