Os03g0411600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1195 family protein.
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Os03g0411600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1195 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.97 | 0.382 | 10.6 | 0.698 | 0.565 | 0.843 | -0.509 | -1.13 | -0.0885 | 21.6 | 27.62 | 5470 | -- | -- |
| 67.22 | 0.382 | 10.6 | 0.54 | 0.562 | 0.747 | -0.439 | -- | 0.0463 | 21.5 | 26.9 | 12387 | -- | -- |
| 66.92 | 0.381 | 10.6 | 0.701 | 0.567 | 0.845 | -- | -1.07 | -0.0908 | 21.7 | 27.66 | 5466 | -- | -- |
| 68.09 | 0.384 | 10.6 | 0.545 | 0.562 | 0.738 | -- | -- | 0.0434 | 21.5 | 26.9 | 12374 | -- | -- |
| 84.31 | 0.428 | 10.6 | 0.815 | -- | 0.776 | -- | -1.01 | -0.0107 | -- | 27.6 | 7207 | -- | -- |
| 85.61 | 0.434 | 10.7 | 0.0816 | 0.519 | -- | -0.589 | -- | -0.299 | 21.3 | -- | -- | -- | -- |
| 86.84 | 0.436 | 10.7 | 0.102 | 0.52 | -- | -- | -- | -0.299 | 21.4 | -- | -- | -- | -- |
| 84.92 | 0.429 | 10.6 | 0.699 | -- | 0.814 | -- | -- | 0.115 | -- | 26.8 | 17480 | -- | -- |
| 71.59 | 0.394 | 10.6 | -- | 0.567 | 0.591 | -- | -- | -0.0989 | 21.8 | 28.4 | 8279 | -- | -- |
| 102.66 | 0.473 | 10.7 | 0.105 | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
| 87.12 | 0.437 | 10.7 | -- | 0.52 | -- | -- | -- | -0.31 | 21.4 | -- | -- | -- | -- |
| 88.95 | 0.439 | 10.6 | -- | -- | 0.569 | -- | -- | -0.107 | -- | 28.51 | 11545 | -- | -- |
| 102.95 | 0.474 | 10.7 | -- | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.95 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 3 | 66.07 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 5 | 66.09 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 9 | 66.26 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 10 | 66.27 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 13 | 66.29 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 10 |
| 24 | 66.35 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 50 | 66.39 | temperature | 25 | 14400 | > th | dose dependent | sin | 20 | NA |
| 56 | 66.39 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 146 | 66.46 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 161 | 66.46 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 21 |
| 205 | 66.49 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 226 | 66.51 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 243 | 66.51 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 407 | 66.82 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 414 | 66.84 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 425 | 66.87 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 441 | 66.92 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 448 | 66.95 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 485 | 67.08 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 499 | 67.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 536 | 67.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 537 | 67.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 547 | 67.26 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 560 | 67.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 561 | 67.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 602 | 67.33 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 629 | 67.36 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 652 | 67.38 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 653 | 67.38 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 676 | 67.40 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 679 | 67.41 | temperature | 25 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 746 | 67.47 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 755 | 67.48 | humidity | 70 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 760 | 67.49 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 857 | 67.59 | temperature | 30 | 14400 | < th | dose independent | sin | 20 | NA |
| 948 | 67.65 | humidity | 70 | 43200 | > th | dose dependent | rect. | 11 | 13 |
| 962 | 67.67 | temperature | 30 | 14400 | > th | dose independent | sin | 21 | NA |