Os03g0410100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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Os03g0410100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.44 | 0.429 | 8.21 | -0.276 | 1.12 | -0.77 | 0.544 | -1.84 | -0.149 | 20.4 | 46.13 | 16 | -- | -- |
| 90.6 | 0.443 | 8.21 | -0.243 | 1.13 | -0.798 | -0.602 | -- | -0.136 | 20.5 | 43.91 | 9 | -- | -- |
| 84.06 | 0.427 | 8.21 | -0.282 | 1.12 | -0.779 | -- | -1.54 | -0.149 | 20.4 | 46.51 | 16 | -- | -- |
| 91.61 | 0.446 | 8.21 | -0.23 | 1.13 | -0.783 | -- | -- | -0.131 | 20.4 | 44.36 | 9 | -- | -- |
| 109.23 | 0.487 | 8.22 | -0.0357 | -- | -1.03 | -- | -1.4 | -0.252 | -- | 4.219 | 687 | -- | -- |
| 101.99 | 0.473 | 8.2 | -0.201 | 0.94 | -- | 0.331 | -- | -0.124 | 18.4 | -- | -- | -- | -- |
| 102.21 | 0.473 | 8.2 | -0.206 | 0.941 | -- | -- | -- | -0.124 | 18.5 | -- | -- | -- | -- |
| 107.46 | 0.483 | 8.19 | -0.237 | -- | -1.15 | -- | -- | -0.188 | -- | 7.179 | 805 | -- | -- |
| 93 | 0.449 | 8.2 | -- | 1.13 | -0.774 | -- | -- | -0.105 | 20.4 | 44.82 | 9 | -- | -- |
| 148.31 | 0.569 | 8.18 | -0.23 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 103.33 | 0.476 | 8.19 | -- | 0.944 | -- | -- | -- | -0.101 | 18.5 | -- | -- | -- | -- |
| 108.96 | 0.486 | 8.18 | -- | -- | -1.15 | -- | -- | -0.153 | -- | 8.87 | 806 | -- | -- |
| 149.71 | 0.571 | 8.17 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 6 | 77.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 11 | 78.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 18 |
| 13 | 78.62 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 17 | 78.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 20 | 79.00 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 25 | 79.11 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 12 | 14 |
| 38 | 79.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 42 | 79.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 61 | 80.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 15 |
| 68 | 80.14 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 69 | 80.15 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 74 | 80.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 15 |
| 76 | 80.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 15 |
| 77 | 80.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 79 | 80.28 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 85 | 80.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 86 | 80.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 87 | 80.38 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 91 | 80.38 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 92 | 80.39 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 101 | 80.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 163 | 80.96 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 166 | 80.96 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 175 | 80.96 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 183 | 81.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 186 | 81.02 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 187 | 81.02 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 191 | 81.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 9 |
| 192 | 81.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 194 | 81.08 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 230 | 81.43 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 236 | 81.47 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 238 | 81.48 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 243 | 81.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 245 | 81.52 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 247 | 81.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 8 |
| 251 | 81.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 256 | 81.60 | humidity | 70.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 263 | 81.63 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 281 | 81.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 285 | 81.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 290 | 81.73 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 291 | 81.73 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 293 | 81.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 294 | 81.73 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 304 | 81.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 328 | 81.81 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 344 | 81.86 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 348 | 81.88 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 355 | 81.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 357 | 81.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 363 | 81.98 | radiation | 1.0 | 270 | < th | dose independent | sin | 16 | NA |
| 365 | 81.98 | radiation | 30.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 370 | 82.02 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 383 | 82.04 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 393 | 82.08 | radiation | 20.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 397 | 82.09 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 20 |
| 398 | 82.09 | radiation | 1.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 403 | 82.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 17 |
| 404 | 82.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 407 | 82.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 409 | 82.14 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 410 | 82.14 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 413 | 82.16 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 415 | 82.16 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 425 | 82.20 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 426 | 82.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 427 | 82.20 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 428 | 82.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 7 |
| 431 | 82.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 442 | 82.24 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 449 | 82.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 16 |
| 450 | 82.28 | temperature | 15.0 | 10 | > th | dose independent | rect. | 15 | 17 |
| 452 | 82.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 16 |
| 464 | 82.32 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 488 | 82.39 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 493 | 82.41 | radiation | 1.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 504 | 82.46 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 15 | 17 |
| 518 | 82.49 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 523 | 82.50 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 544 | 82.52 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 614 | 82.63 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 622 | 82.64 | radiation | 40.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 645 | 82.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 660 | 82.71 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 667 | 82.72 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 677 | 82.74 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 705 | 82.79 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 725 | 82.80 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 727 | 82.81 | radiation | 40.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 733 | 82.82 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 737 | 82.83 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 738 | 82.83 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 739 | 82.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 753 | 82.86 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 760 | 82.88 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 762 | 82.88 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 763 | 82.88 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 8 | 7 |
| 764 | 82.88 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 7 |
| 770 | 82.88 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 7 |
| 789 | 82.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 804 | 82.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 822 | 82.96 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 860 | 83.01 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 880 | 83.04 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 7 |
| 890 | 83.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 891 | 83.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 908 | 83.08 | radiation | 10.0 | 270 | > th | dose independent | sin | 7 | NA |
| 947 | 83.12 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 970 | 83.18 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 994 | 83.20 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 22 |