Os03g0402800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZIM domain containing protein.
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Os03g0402800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZIM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.86 | 0.579 | 10.9 | 0.728 | 0.397 | -3.56 | -0.122 | -4 | 0.555 | 7.94 | 8.836 | 653 | -- | -- |
| 152.18 | 0.575 | 10.9 | 0.679 | 0.396 | -2.67 | -0.13 | -- | 0.564 | 7.91 | 8.777 | 653 | -- | -- |
| 151.47 | 0.573 | 10.9 | 0.732 | 0.406 | -3.85 | -- | -4.63 | 0.551 | 7.72 | 8.8 | 592 | -- | -- |
| 152.21 | 0.575 | 10.9 | 0.678 | 0.408 | -2.84 | -- | -- | 0.563 | 7.85 | 8.779 | 590 | -- | -- |
| 159.8 | 0.589 | 10.9 | 0.743 | -- | -3.74 | -- | -5.02 | 0.546 | -- | 8.7 | 570 | -- | -- |
| 184.33 | 0.636 | 10.9 | 0.428 | 0.288 | -- | 0.287 | -- | 0.462 | 8.04 | -- | -- | -- | -- |
| 184.55 | 0.636 | 10.9 | 0.435 | 0.291 | -- | -- | -- | 0.461 | 7.75 | -- | -- | -- | -- |
| 160.67 | 0.59 | 10.9 | 0.669 | -- | -2.44 | -- | -- | 0.561 | -- | 8.871 | 740 | -- | -- |
| 163.79 | 0.596 | 10.9 | -- | 0.385 | -2.32 | -- | -- | 0.475 | 7.82 | 8.836 | 653 | -- | -- |
| 189.12 | 0.643 | 10.9 | 0.439 | -- | -- | -- | -- | 0.465 | -- | -- | -- | -- | -- |
| 189.55 | 0.644 | 10.9 | -- | 0.294 | -- | -- | -- | 0.413 | 7.65 | -- | -- | -- | -- |
| 171.68 | 0.61 | 10.9 | -- | -- | -2.18 | -- | -- | 0.477 | -- | 8.797 | 686 | -- | -- |
| 194.21 | 0.65 | 10.9 | -- | -- | -- | -- | -- | 0.417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.43 | wind | 9 | 270 | > th | dose dependent | sin | 10 | NA |
| 2 | 147.15 | wind | 9 | 270 | > th | dose independent | sin | 11 | NA |
| 5 | 147.96 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 9 | 148.97 | wind | 7 | 270 | > th | dose dependent | sin | 13 | NA |
| 10 | 148.99 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 5 |
| 11 | 148.99 | wind | 9 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 18 | 149.25 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 20 | 149.32 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 14 |
| 28 | 149.35 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 32 | 149.45 | wind | 9 | 270 | < th | dose independent | sin | 10 | NA |
| 34 | 149.64 | radiation | 10 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 38 | 149.79 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 46 | 150.13 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 50 | 150.24 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 73 | 150.71 | wind | 9 | 720 | > th | dose independent | rect. | 18 | 23 |
| 79 | 150.97 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 14 |
| 89 | 151.01 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 11 |
| 92 | 151.05 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 120 | 151.49 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 17 |
| 123 | 151.59 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 143 | 152.04 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 147 | 152.05 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 180 | 152.30 | wind | 9 | 720 | < th | dose independent | sin | 19 | NA |
| 186 | 152.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 188 | 152.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 209 | 152.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 213 | 152.62 | wind | 7 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 214 | 152.64 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 216 | 152.65 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 217 | 152.66 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 23 |
| 246 | 152.78 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 260 | 152.88 | wind | 9 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 262 | 152.89 | wind | 7 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 268 | 152.92 | wind | 7 | 270 | > th | dose dependent | rect. | 17 | 12 |
| 275 | 152.94 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 294 | 153.01 | wind | 9 | 720 | > th | dose independent | sin | 20 | NA |
| 295 | 153.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 316 | 153.06 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 324 | 153.11 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 340 | 153.11 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 22 |
| 408 | 153.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 436 | 153.32 | wind | 9 | 720 | > th | dose independent | rect. | 18 | 19 |
| 518 | 153.62 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 9 |
| 532 | 153.65 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 578 | 153.85 | wind | 9 | 720 | > th | dose dependent | sin | 3 | NA |
| 655 | 154.10 | radiation | 10 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 673 | 154.19 | humidity | 90 | 14400 | > th | dose independent | sin | 7 | NA |
| 674 | 154.19 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 692 | 154.19 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 799 | 154.48 | wind | 9 | 270 | > th | dose independent | rect. | 17 | 6 |
| 904 | 154.87 | wind | 9 | 720 | > th | dose independent | sin | 8 | NA |
| 940 | 154.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 941 | 154.98 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 981 | 155.10 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 14 |