Os03g0390900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0390900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.11 | 0.29 | 9.21 | -0.284 | 0.23 | -0.631 | -0.917 | -1.29 | 0.255 | 12.9 | 25.86 | 2 | -- | -- |
| 40.22 | 0.298 | 9.23 | -0.498 | 0.257 | -0.536 | -0.46 | -- | 0.213 | 13.1 | 25.86 | 2 | -- | -- |
| 40.58 | 0.299 | 9.22 | -0.429 | 0.26 | -0.568 | -- | -0.544 | 0.231 | 13.4 | 25.55 | 2 | -- | -- |
| 41.08 | 0.3 | 9.23 | -0.512 | 0.265 | -0.53 | -- | -- | 0.213 | 13.4 | 25.7 | 2 | -- | -- |
| 43.4 | 0.307 | 9.24 | -0.468 | -- | -0.759 | -- | -0.615 | 0.186 | -- | 26.63 | 2 | -- | -- |
| 44.55 | 0.313 | 9.2 | -0.374 | 0.386 | -- | -0.442 | -- | 0.327 | 13.3 | -- | -- | -- | -- |
| 45.33 | 0.315 | 9.2 | -0.389 | 0.387 | -- | -- | -- | 0.325 | 13.5 | -- | -- | -- | -- |
| 44.04 | 0.309 | 9.24 | -0.558 | -- | -0.739 | -- | -- | 0.17 | -- | 26.71 | 2 | -- | -- |
| 47.4 | 0.322 | 9.21 | -- | 0.317 | -0.341 | -- | -- | 0.305 | 13.5 | 25.7 | 2 | -- | -- |
| 54.53 | 0.345 | 9.21 | -0.405 | -- | -- | -- | -- | 0.317 | -- | -- | -- | -- | -- |
| 49.33 | 0.329 | 9.19 | -- | 0.394 | -- | -- | -- | 0.369 | 13.5 | -- | -- | -- | -- |
| 52.01 | 0.337 | 9.22 | -- | -- | -0.574 | -- | -- | 0.253 | -- | 26.7 | 2 | -- | -- |
| 58.85 | 0.358 | 9.2 | -- | -- | -- | -- | -- | 0.362 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.73 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 29 | 38.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 30 | 38.37 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 31 | 38.38 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 32 | 38.39 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 35 | 38.42 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 39 | 38.42 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 46 | 38.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 47 | 38.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 48 | 38.46 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 54 | 38.47 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 114 | 38.85 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 258 | 39.40 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 297 | 39.52 | temperature | 25.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 313 | 39.56 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 365 | 39.67 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 378 | 39.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 395 | 39.77 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 15 |
| 411 | 39.80 | temperature | 25.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 418 | 39.81 | temperature | 25.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 419 | 39.81 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 432 | 39.83 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 433 | 39.83 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 449 | 39.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 464 | 39.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 467 | 39.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 472 | 39.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 478 | 39.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 480 | 39.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 521 | 39.94 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 537 | 39.95 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 9 |
| 542 | 39.96 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 581 | 40.00 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 598 | 40.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 606 | 40.02 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 21 |
| 608 | 40.02 | temperature | 20.0 | 10 | < th | dose independent | rect. | 22 | 23 |
| 613 | 40.03 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 628 | 40.04 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 638 | 40.05 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 658 | 40.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 660 | 40.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 683 | 40.08 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 689 | 40.09 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 707 | 40.11 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 761 | 40.15 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 763 | 40.15 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 7 |
| 786 | 40.17 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 796 | 40.17 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 808 | 40.18 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 815 | 40.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 816 | 40.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 827 | 40.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 832 | 40.20 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 835 | 40.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 836 | 40.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 838 | 40.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 851 | 40.22 | temperature | 20.0 | 10 | > th | dose independent | sin | 11 | NA |
| 853 | 40.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 865 | 40.23 | temperature | 20.0 | 10 | < th | dose independent | sin | 10 | NA |
| 868 | 40.23 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 872 | 40.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 881 | 40.24 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 934 | 40.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 940 | 40.28 | temperature | 20.0 | 10 | > th | dose independent | no | NA | NA |
| 942 | 40.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 979 | 40.30 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 984 | 40.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 986 | 40.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 989 | 40.31 | temperature | 20.0 | 10 | < th | dose independent | no | NA | NA |
| 991 | 40.31 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 23 |