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Os03g0387800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0188) R2 : 0.534
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.974 (0.0479) R2dC : 0.426 R2C : 0.398
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.401 (0.0395) R2dN8 : 0.135 R2N8 : 0.108
σ : 0.354
deviance : 57.42
__
_____
C
peak time of C : 8.14
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.6 0.268 11.9 -1.29 0.989 0.792 0.648 -1.79 0.075 8.41 16.22 1272 -- --
35.51 0.278 11.8 -0.891 0.979 0.798 0.719 -- 0.17 8.19 14.31 1405 -- --
33.62 0.27 11.9 -1.32 1.06 0.783 -- -2.07 0.0633 8.48 17.3 1048 -- --
36.92 0.283 11.8 -0.853 0.98 0.812 -- -- 0.187 8.37 13.26 1311 -- --
89.01 0.439 11.9 -1.07 -- 0.594 -- -1.09 0.164 -- 12.1 4366 -- --
46.48 0.32 11.8 -0.621 0.977 -- 0.676 -- 0.334 8.14 -- -- -- --
47.86 0.324 11.8 -0.602 0.977 -- -- -- 0.334 8.09 -- -- -- --
89.68 0.441 11.8 -0.895 -- 0.724 -- -- 0.196 -- 13.41 2927 -- --
53.53 0.341 11.8 -- 0.996 0.454 -- -- 0.332 8.35 13.03 1205 -- --
100.26 0.468 11.8 -0.594 -- -- -- -- 0.345 -- -- -- -- --
57.42 0.354 11.8 -- 0.974 -- -- -- 0.401 8.14 -- -- -- --
105.6 0.479 11.8 -- -- 0.446 -- -- 0.344 -- 12.15 1424 -- --
109.56 0.489 11.8 -- -- -- -- -- 0.411 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.59 radiation 20.0 14400 < th dose dependent rect. 24 5
4 30.84 radiation 20.0 14400 < th dose dependent rect. 19 10
18 31.32 radiation 30.0 14400 < th dose independent rect. 16 16
20 31.34 temperature 15.0 270 > th dose dependent rect. 13 19
27 31.55 radiation 30.0 14400 < th dose independent rect. 7 1
28 31.56 radiation 10.0 14400 < th dose independent rect. 24 5
29 31.59 radiation 30.0 14400 < th dose independent rect. 2 6
31 31.59 radiation 30.0 14400 < th dose independent rect. 18 14
33 31.59 temperature 15.0 270 > th dose dependent rect. 12 21
35 31.60 radiation 30.0 14400 < th dose independent rect. 20 12
44 31.65 radiation 40.0 14400 < th dose independent rect. 15 18
48 31.71 radiation 10.0 14400 < th dose independent rect. 19 10
55 31.77 wind 5.0 43200 < th dose independent rect. 13 1
78 31.90 radiation 10.0 14400 < th dose independent rect. 17 13
79 31.90 radiation 1.0 14400 < th dose dependent rect. 18 12
81 31.92 humidity 90.0 14400 < th dose independent rect. 24 1
86 31.95 wind 5.0 43200 > th dose independent rect. 13 1
92 31.98 humidity 90.0 14400 > th dose dependent rect. 23 4
116 32.12 radiation 1.0 14400 < th dose dependent rect. 18 1
119 32.12 radiation 1.0 14400 < th dose dependent rect. 18 7
123 32.13 humidity 90.0 14400 > th dose dependent rect. 24 2
128 32.14 radiation 40.0 14400 < th dose independent rect. 15 14
131 32.15 radiation 40.0 14400 > th dose dependent rect. 7 2
141 32.15 radiation 1.0 14400 > th dose dependent rect. 18 11
150 32.16 radiation 40.0 14400 < th dose independent rect. 15 1
153 32.17 radiation 30.0 14400 > th dose independent rect. 16 16
160 32.20 temperature 15.0 43200 < th dose independent rect. 5 1
168 32.24 humidity 90.0 14400 > th dose dependent rect. 22 6
179 32.27 wind 5.0 43200 < th dose independent rect. 11 4
200 32.32 radiation 1.0 43200 > th dose dependent rect. 18 1
211 32.32 radiation 20.0 14400 > th dose dependent rect. 17 14
217 32.34 wind 5.0 43200 > th dose independent rect. 11 4
220 32.36 radiation 40.0 14400 < th dose independent rect. 15 6
225 32.38 temperature 15.0 1440 > th dose dependent rect. 13 18
227 32.39 radiation 10.0 14400 < th dose independent rect. 17 1
245 32.42 temperature 15.0 43200 < th dose independent rect. 3 3
246 32.42 radiation 1.0 43200 < th dose dependent rect. 7 2
251 32.43 radiation 1.0 43200 > th dose independent rect. 7 2
252 32.43 radiation 1.0 43200 < th dose independent rect. 7 2
253 32.43 radiation 10.0 14400 < th dose independent rect. 17 4
254 32.43 wind 5.0 43200 < th dose independent rect. 10 6
291 32.45 wind 9.0 43200 < th dose independent rect. 18 3
294 32.45 wind 5.0 43200 > th dose independent rect. 10 6
303 32.46 humidity 90.0 14400 < th dose independent rect. 23 4
317 32.47 temperature 25.0 4320 > th dose independent rect. 15 3
358 32.50 wind 7.0 43200 > th dose dependent rect. 24 1
376 32.52 radiation 20.0 14400 > th dose dependent rect. 6 2
406 32.54 humidity 90.0 43200 > th dose independent rect. 5 2
424 32.55 temperature 25.0 4320 < th dose independent rect. 15 3
444 32.58 temperature 15.0 43200 > th dose independent rect. 5 1
451 32.59 radiation 1.0 14400 < th dose dependent sin 10 NA
456 32.59 temperature 30.0 1440 < th dose dependent rect. 13 18
463 32.60 temperature 15.0 1440 > th dose dependent sin 15 NA
511 32.62 precipitation 0.1 43200 > th dose dependent rect. 20 2
524 32.63 radiation 1.0 43200 > th dose independent rect. 10 1
537 32.64 radiation 1.0 43200 < th dose independent rect. 10 1
542 32.64 radiation 1.0 43200 < th dose dependent rect. 10 1
543 32.64 temperature 20.0 1440 > th dose dependent rect. 13 11
569 32.66 wind 9.0 43200 > th dose independent rect. 19 2
598 32.68 radiation 30.0 14400 > th dose independent rect. 7 1
604 32.68 temperature 15.0 43200 > th dose independent rect. 3 4
640 32.69 wind 9.0 43200 > th dose dependent rect. 18 5
649 32.69 temperature 30.0 270 < th dose dependent rect. 7 20
651 32.70 wind 9.0 43200 < th dose independent rect. 19 1
654 32.70 wind 9.0 43200 > th dose independent rect. 18 5
669 32.71 temperature 25.0 4320 < th dose independent rect. 11 2
693 32.72 wind 9.0 43200 > th dose independent rect. 18 7
743 32.74 wind 3.0 43200 > th dose dependent rect. 13 1
753 32.75 wind 7.0 43200 > th dose independent rect. 5 1
786 32.77 temperature 20.0 10 > th dose dependent rect. 15 17
790 32.78 wind 7.0 43200 > th dose independent rect. 24 1
807 32.79 wind 9.0 43200 < th dose independent rect. 5 1
816 32.79 temperature 30.0 1440 < th dose dependent sin 15 NA
834 32.80 wind 9.0 43200 < th dose independent rect. 18 7
850 32.80 temperature 15.0 1440 > th dose dependent rect. 20 22
857 32.81 temperature 25.0 4320 < th dose independent rect. 11 7
882 32.82 temperature 20.0 1440 > th dose dependent rect. 20 1
895 32.83 precipitation 0.1 43200 > th dose independent rect. 20 2
910 32.83 temperature 15.0 1440 > th dose dependent rect. 1 22
924 32.84 temperature 15.0 1440 > th dose dependent no NA NA
945 32.85 precipitation 0.1 43200 < th dose independent rect. 20 2
956 32.85 precipitation 0.1 43200 < th dose dependent rect. 20 2
968 32.86 radiation 1.0 43200 > th dose independent rect. 18 11
979 32.86 wind 3.0 43200 > th dose dependent rect. 10 5