Os03g0374900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter I family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0374900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amino acid/polyamine transporter I family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.08 | 0.558 | 7.51 | -0.00782 | 1.48 | 1.48 | 1.04 | 1.42 | -0.636 | 8.85 | 25.5 | 245 | -- | -- |
| 143.83 | 0.559 | 7.49 | 0.214 | 1.48 | 1.34 | 1.06 | -- | -0.595 | 8.77 | 25.7 | 253 | -- | -- |
| 144.62 | 0.56 | 7.51 | 0.0211 | 1.46 | 1.48 | -- | 1.44 | -0.635 | 8.82 | 25.6 | 261 | -- | -- |
| 147.45 | 0.566 | 7.48 | 0.256 | 1.47 | 1.36 | -- | -- | -0.584 | 8.82 | 25.78 | 249 | -- | -- |
| 230.65 | 0.707 | 7.54 | 0.161 | -- | 2.17 | -- | 1.54 | -0.555 | -- | 31.2 | 590 | -- | -- |
| 171.04 | 0.613 | 7.55 | -0.128 | 1.57 | -- | 1.1 | -- | -0.877 | 8.23 | -- | -- | -- | -- |
| 174.75 | 0.619 | 7.55 | -0.096 | 1.57 | -- | -- | -- | -0.878 | 8.23 | -- | -- | -- | -- |
| 232.79 | 0.711 | 7.51 | 0.446 | -- | 2.18 | -- | -- | -0.496 | -- | 31.6 | 587 | -- | -- |
| 149.02 | 0.569 | 7.49 | -- | 1.48 | 1.27 | -- | -- | -0.629 | 8.77 | 25.8 | 241 | -- | -- |
| 310.29 | 0.823 | 7.59 | -0.0845 | -- | -- | -- | -- | -0.86 | -- | -- | -- | -- | -- |
| 174.99 | 0.619 | 7.54 | -- | 1.57 | -- | -- | -- | -0.867 | 8.23 | -- | -- | -- | -- |
| 237.73 | 0.718 | 7.52 | -- | -- | 2.02 | -- | -- | -0.576 | -- | 31.96 | 580 | -- | -- |
| 310.48 | 0.822 | 7.59 | -- | -- | -- | -- | -- | -0.851 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 20 | 135.07 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 23 | 135.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 25 | 135.35 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 30 | 135.64 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 39 | 136.23 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 18 |
| 40 | 136.25 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 16 |
| 50 | 136.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 89 | 138.30 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 22 |
| 124 | 139.32 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 22 |
| 179 | 140.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 205 | 141.14 | temperature | 25 | 270 | < th | dose dependent | rect. | 12 | 22 |
| 246 | 141.74 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 254 | 141.81 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 255 | 141.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 258 | 141.84 | temperature | 25 | 270 | < th | dose independent | sin | 8 | NA |
| 281 | 142.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 299 | 142.35 | temperature | 25 | 270 | > th | dose independent | sin | 8 | NA |
| 311 | 142.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 378 | 143.13 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 389 | 143.16 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 430 | 143.48 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 457 | 143.66 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 471 | 143.78 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 487 | 143.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 19 |
| 489 | 143.89 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 11 |
| 501 | 143.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 12 |
| 532 | 144.16 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 20 |
| 548 | 144.24 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 574 | 144.31 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 588 | 144.38 | temperature | 25 | 720 | < th | dose dependent | sin | 15 | NA |
| 593 | 144.41 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 11 |
| 631 | 144.54 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 651 | 144.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 656 | 144.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 674 | 144.72 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 698 | 144.82 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 22 |
| 713 | 144.90 | wind | 9 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 720 | 144.92 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 20 |
| 740 | 145.00 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 745 | 145.03 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 760 | 145.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 782 | 145.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 821 | 145.33 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 836 | 145.38 | wind | 9 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 842 | 145.40 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 860 | 145.46 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 900 | 145.57 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 910 | 145.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 965 | 145.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 996 | 145.83 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 15 |