Os03g0374400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0374400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.44 | 0.58 | 5.42 | 1.23 | 1.2 | 1.97 | -0.00514 | -0.346 | 0.0501 | 8.72 | 26.1 | 71 | -- | -- |
| 152.54 | 0.575 | 5.43 | 1.18 | 1.19 | 2.01 | 0.0827 | -- | 0.0458 | 8.83 | 26.32 | 70 | -- | -- |
| 152.3 | 0.575 | 5.42 | 1.25 | 1.19 | 1.98 | -- | -0.414 | 0.0596 | 8.81 | 26.4 | 70 | -- | -- |
| 152.56 | 0.575 | 5.43 | 1.18 | 1.19 | 2 | -- | -- | 0.0438 | 8.81 | 26.3 | 70 | -- | -- |
| 206.9 | 0.67 | 5.44 | 1.44 | -- | 2.23 | -- | -0.997 | 0.0978 | -- | 30.18 | 476 | -- | -- |
| 209.5 | 0.679 | 5.53 | 0.697 | 1.24 | -- | -0.52 | -- | -0.398 | 7.18 | -- | -- | -- | -- |
| 210.17 | 0.679 | 5.53 | 0.688 | 1.24 | -- | -- | -- | -0.396 | 7.27 | -- | -- | -- | -- |
| 207.87 | 0.672 | 5.46 | 1.26 | -- | 2.22 | -- | -- | 0.0577 | -- | 29.9 | 482 | -- | -- |
| 185.38 | 0.634 | 5.48 | -- | 1.21 | 1.52 | -- | -- | -0.19 | 8.29 | 25.91 | 64 | -- | -- |
| 291.48 | 0.798 | 5.56 | 0.709 | -- | -- | -- | -- | -0.375 | -- | -- | -- | -- | -- |
| 222.64 | 0.698 | 5.55 | -- | 1.25 | -- | -- | -- | -0.473 | 7.23 | -- | -- | -- | -- |
| 245.48 | 0.73 | 5.51 | -- | -- | 1.79 | -- | -- | -0.152 | -- | 29.73 | 412 | -- | -- |
| 304.76 | 0.815 | 5.57 | -- | -- | -- | -- | -- | -0.454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.81 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 3 | 138.67 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 33 | 143.76 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 41 | 145.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 43 | 145.23 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 46 | 145.44 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 61 | 146.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 96 | 149.83 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 21 |
| 107 | 150.33 | temperature | 20.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 188 | 153.33 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 189 | 153.35 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 214 | 153.94 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 233 | 154.39 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 234 | 154.40 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 241 | 154.46 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 244 | 154.54 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 270 | 154.90 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 275 | 154.98 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 284 | 155.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 292 | 155.30 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 336 | 156.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 10 |
| 341 | 156.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 424 | 157.85 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 431 | 157.96 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 504 | 159.00 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 521 | 159.18 | temperature | 30.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 633 | 160.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 680 | 161.32 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 18 |
| 732 | 162.29 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 830 | 163.84 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 832 | 163.91 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 841 | 164.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 882 | 164.48 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 20 |