BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0374400 Os03g0374400|AK069719
(346 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02370.1 | chr2:621841-623084 FORWARD LENGTH=321 359 e-99
AT1G12450.1 | chr1:4244496-4245808 FORWARD LENGTH=304 210 9e-55
AT4G12000.1 | chr4:7193527-7194942 REVERSE LENGTH=307 207 5e-54
AT4G22850.1 | chr4:11994194-11995941 FORWARD LENGTH=297 206 2e-53
AT1G03260.1 | chr1:795678-798102 REVERSE LENGTH=275 69 3e-12
AT1G22850.1 | chr1:8080671-8082816 REVERSE LENGTH=345 67 1e-11
AT5G19070.1 | chr5:6375569-6377470 FORWARD LENGTH=281 66 3e-11
AT1G71940.2 | chr1:27078781-27080191 FORWARD LENGTH=307 49 5e-06
AT4G09580.1 | chr4:6052721-6054313 REVERSE LENGTH=288 48 7e-06
>AT2G02370.1 | chr2:621841-623084 FORWARD LENGTH=321
Length = 320
Score = 359 bits (922), Expect = e-99, Method: Compositional matrix adjust.
Identities = 178/317 (56%), Positives = 225/317 (70%), Gaps = 18/317 (5%)
Query: 34 SGNGIEQPEQNTKDDEYERLV-----RPAHSVIADDNTVVLPEEPTSRSIWWMKVLLGCF 88
S I + +D+EY RLV PA +V++ + E + + +WW+K L C
Sbjct: 8 SREDIANSTPHMRDNEYVRLVVAHEASPAETVLSLSQS----EVQSKKFMWWLKALGICA 63
Query: 89 LLILVSYVFVKWGVPFAFEKVLLPIMQWEASAFGRPXXXXXXXXXXXXFPVTLVPSGPSM 148
+ +L++ VF KWGVPF F+KVL+PI+QWEA+AFGRP FPV L+PSGPSM
Sbjct: 64 VALLLTLVFGKWGVPFVFQKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSM 123
Query: 149 WLAGMIFGYGWGFLIIMVGTTIGMVVPYWIGSLFRERLHAWLKRWPQQIALIKLAGEGNW 208
WLAGMIFGYG GF+IIMVGTTIGMV+PY IG +FR+RLH WLKRWP+Q A+++LA EG+W
Sbjct: 124 WLAGMIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRLHQWLKRWPRQAAVLRLAAEGSW 183
Query: 209 FQQFRVVALFRISPFPYTIFNYAVTVTEIKFNPYLCGSIAGMIPEAFIYIYSGRLIRTLA 268
F QFRVVA+FR+SPFPYTIFNYA+ VT ++F PY GSIAGMIPEAFIYIYSGRLIRT A
Sbjct: 184 FHQFRVVAIFRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFA 243
Query: 269 DMKYGNYKMTPVEITYNAISFVIAVVLTVAFTVYAKRALNDIKESEGILTEEYGIS---- 324
D++YG+ ++T VEI YN IS VIAVV TVAFTVYAKRAL +++ +E EE +
Sbjct: 244 DVQYGHQRLTTVEIVYNVISLVIAVVTTVAFTVYAKRALRELQNAEANEDEEVQVRKVRF 303
Query: 325 -----TGHKNPHQERSP 336
H+ + +R P
Sbjct: 304 EMKNVVQHEEDNHQRLP 320
>AT1G12450.1 | chr1:4244496-4245808 FORWARD LENGTH=304
Length = 303
Score = 210 bits (534), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 148/239 (61%), Gaps = 1/239 (0%)
Query: 77 SIW-WMKVLLGCFLLILVSYVFVKWGVPFAFEKVLLPIMQWEASAFGRPXXXXXXXXXXX 135
S+W W+K++ L +++V +KW PF EK L+P + W + F P
Sbjct: 55 SVWFWVKLISLVVCLGSLAFVIIKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVA 114
Query: 136 XFPVTLVPSGPSMWLAGMIFGYGWGFLIIMVGTTIGMVVPYWIGSLFRERLHAWLKRWPQ 195
FP L+PS PSMW+AG+ FGYG GFL+I+ +IG+ +P+ IG LF ++ WLK++P+
Sbjct: 115 LFPSILLPSSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQEWLKKYPK 174
Query: 196 QIALIKLAGEGNWFQQFRVVALFRISPFPYTIFNYAVTVTEIKFNPYLCGSIAGMIPEAF 255
+ A+++ AGEG WF QF+ V L R+SPFPY I+NY T + + PY+ GS+ GM+PE F
Sbjct: 175 KAAILRAAGEGTWFHQFQAVTLIRVSPFPYIIYNYCALATGVHYGPYILGSLVGMVPEIF 234
Query: 256 IYIYSGRLIRTLADMKYGNYKMTPVEITYNAISFVIAVVLTVAFTVYAKRALNDIKESE 314
+ IY+G ++RTLA + ++ VEI N + F + T+ T+YAK+ L+ ++ +
Sbjct: 235 VSIYTGIMLRTLAVASDTRHTLSVVEIVVNVLGFCVTASATIVCTIYAKKKLSAMQSED 293
>AT4G12000.1 | chr4:7193527-7194942 REVERSE LENGTH=307
Length = 306
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 147/248 (59%), Gaps = 3/248 (1%)
Query: 75 SRSIW-WMKVLLGCFLLILVSYVFVKWGVPFAFEKVLLPIMQWEASAFGRPXXXXXXXXX 133
RS+W W+K+ L L + KW P +K L+P+++WE F P
Sbjct: 59 KRSVWFWIKLGLFFTFLTALGLAGYKWLYPLIMDKELIPLIKWEMETFTHPVCGILVFAS 118
Query: 134 XXXFPVTLVPSGPSMWLAGMIFGYGWGFLIIMVGTTIGMVVPYWIGSLFRERLHAWLKRW 193
FPV L+P+ PSMW+AG+ FGY +G L+ + IG+ +PY+I LF ++ WL+R+
Sbjct: 119 VSLFPVILIPTTPSMWVAGITFGYFYGLLLTLPAVAIGVSLPYFISYLFLNKIQGWLERY 178
Query: 194 PQQIALIKLAGEGNWFQQFRVVALFRISPFPYTIFNYAVTVTEIKFNPYLCGSIAGMIPE 253
P Q A+++ AG G+WF QFR V L RISPFP+ ++NY T +KF PY+ GS+ GM PE
Sbjct: 179 PDQAAMLRAAGGGSWFHQFRAVTLIRISPFPFAVYNYCAVATRVKFGPYMAGSLVGMAPE 238
Query: 254 AFIYIYSGRLIRTLADMKYGNYK-MTPVEITYNAISFVIAVVLTVAFTVYAKRALNDI-K 311
F+ IY+G LIRTLAD K ++ ++I N FV VV TV T YAKR L + K
Sbjct: 239 IFVAIYTGILIRTLADASTAEQKGLSILQIVLNIFGFVATVVTTVLITKYAKRQLEVMKK 298
Query: 312 ESEGILTE 319
E E +L +
Sbjct: 299 EKEALLLQ 306
>AT4G22850.1 | chr4:11994194-11995941 FORWARD LENGTH=297
Length = 296
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 150/246 (60%), Gaps = 2/246 (0%)
Query: 74 TSRSIWWMKVLLGCFLLILVSYVFVKWGVPFAFEKVLLPIMQWEASAFGRPXXXXXXXXX 133
+SR +W+K+ L L ++ V W P +K L+P++QWE F P
Sbjct: 50 SSRFWFWVKLSLLFAFLAALAVVGYIWIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFAS 109
Query: 134 XXXFPVTLVPSGPSMWLAGMIFGYGWGFLIIMVGTTIGMVVPYWIGSLFRERLHAWLKRW 193
FP L+PS PSMW+AGM FGYG+GFL+I+ +G+ +PY+IG LF ++ WL+R+
Sbjct: 110 VAIFPTILLPSTPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHKIQGWLERY 169
Query: 194 PQQIALIKLAGEGNWFQQFRVVALFRISPFPYTIFNYAVTVTEIKFNPYLCGSIAGMIPE 253
P Q A+++ AGEGNW QF +V L RISPFPY ++NY T +K+ PY+ GS+ GM+PE
Sbjct: 170 PDQAAVLRAAGEGNWLHQFLLVTLIRISPFPYILYNYCSVATRVKYGPYITGSLLGMVPE 229
Query: 254 AFIYIYSGRLIRTLADMKYGNYK-MTPVEITYNAISFVIAVVLTVAFTVYAKRALNDI-K 311
F+ IY+G L+RTLA+ + ++ ++ N + F+ V T+ T YAKR L + K
Sbjct: 230 VFVAIYTGILVRTLAEASSAEEQGLSVTQVILNILGFLATVATTILITKYAKRQLETMKK 289
Query: 312 ESEGIL 317
E E +L
Sbjct: 290 EDEALL 295
>AT1G03260.1 | chr1:795678-798102 REVERSE LENGTH=275
Length = 274
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 138 PVTLV--PSGPSMWLAGMIFGYGWGFLIIMVGTTIGMVVPYWIG-SLFRERLHAWLKRWP 194
P+T+V P+ G +FG GF+ +G T+G + +G ++ + + + +K +P
Sbjct: 61 PLTIVAVPASVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYP 120
Query: 195 Q-QIALIKLAGEGNWFQQFRVVALFRISP-FPYTIFNYAVTVTEIKFNPYLCGSIAGMIP 252
+ Q + + G F++V L R+ P P+ + NY ++VT ++ Y+ + GM+P
Sbjct: 121 KFQAVSVAIQKSG-----FKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMP 175
Query: 253 EAFIYIYSGRLIRTLADMKYGNYKMTPVEITYNAISFVIAVVLTVAFTVYAKRALNDIKE 312
F +Y G ++ L+D+ +G ++++ + +AV+L + T AK +L+
Sbjct: 176 ITFALVYVGTTLKDLSDITHGWHEVSVFRWVIMMVGVALAVILIICITRVAKSSLDKALA 235
Query: 313 SEGILTEEYGISTGHKNPHQERSPSRPVPLD 343
G TE G KN P P D
Sbjct: 236 ENG--TEL----DGKKNDDASVLPIAEPPPD 260
>AT1G22850.1 | chr1:8080671-8082816 REVERSE LENGTH=345
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 142 VPSGPSMWLAGMIFGYGWGFLIIMVGTTIGMVVPYWIGSLF-RERLHAWLKRWPQQIALI 200
+P+ P AG++FG G +I+ + T+ V + I F RER+ ++ + +A+
Sbjct: 168 IPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNKKFLAID 227
Query: 201 KLAGEGNWFQQFRVVALFRISPF-PYTIFNYAVTVTEIKFNPYLCGSIAGMIPEAFIYIY 259
K GE FRVV L R+SP P+++ NY +T +KF PY+ GS GM+P ++ Y+
Sbjct: 228 KAIGE----NGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGSWAYVS 283
Query: 260 SGRLIRTL 267
+G R +
Sbjct: 284 AGAFGRAI 291
>AT5G19070.1 | chr5:6375569-6377470 FORWARD LENGTH=281
Length = 280
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 8/243 (3%)
Query: 79 WWMKVLLGCFLLILVSYVFVKWGVPFAFEKVLLPIMQWEASAFGRPXXXXXXXXXXXXFP 138
W + + L+++ + V + +P EK+L + W G P
Sbjct: 5 WGSALRISVLLILVAAIVLACYFLPV--EKLLKDFLLWVEQDLG-PWGPFALAVAYIPLT 61
Query: 139 VTLVPSGPSMWLAGMIFGYGWGFLIIMVGTTIGMVVPYWIG-SLFRERLHAWLKRWPQQI 197
V VP+ G +FG GF+ VG T+G + +G ++ + + A LK +PQ
Sbjct: 62 VLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQ-F 120
Query: 198 ALIKLAGEGNWFQQFRVVALFRISPFPYTIFNYAVTVTEIKFNPYLCGSIAGMIPEAFIY 257
+ LA E + F+ ++ L + PF ++ NY ++VT I+ PYL S GM+P
Sbjct: 121 QSVALAIEKSGFKICLLLRLAPLLPF--SMLNYLLSVTPIRLGPYLLSSWLGMMPITLAL 178
Query: 258 IYSGRLIRTLADMKYGNYKMTPVEITYNAISFVIAVVLTVAFTVYAKRALND-IKESEGI 316
+Y G ++ L+D+ + + +P + S VI+V+L V T AK AL + E G
Sbjct: 179 VYVGTTLKDLSDVTHKWSEFSPGRWAFLISSLVISVILMVCVTKVAKDALRKALAEHGGD 238
Query: 317 LTE 319
+ E
Sbjct: 239 MNE 241
>AT1G71940.2 | chr1:27078781-27080191 FORWARD LENGTH=307
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 150 LAGMIFGYGWGFLIIMVGTTIGMVVPYWIGSLFRERLHAWLKRWPQQIALIKLAGEGNWF 209
LAG +FG G ++++ T G +++ L L WL WP ++ +
Sbjct: 121 LAGALFGVFKGVVLVVFNATAGATSCFFLSKLIGRPLITWL--WPDKLRFFQAEISKRRD 178
Query: 210 QQFRVVALFRISP-FPYTIFNYAVTVTEIKFNPYLCGSIAGMIPEAFIYIYSGRLIRTLA 268
+ + RI+P P N A + ++ F+ + ++ G+IP A+I + +G I L
Sbjct: 179 KLLNYMLFLRITPTLPNLFINLASPIVDVPFHVFFLATLIGLIPAAYITVRAGLAIGDLK 238
Query: 269 DMK 271
+K
Sbjct: 239 SVK 241
>AT4G09580.1 | chr4:6052721-6054313 REVERSE LENGTH=288
Length = 287
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 150 LAGMIFGYGWGFLIIMVGTTIGMVVPYWIGSLFRERLHAWLKRWPQQIALIKLAGEGNWF 209
LAG +FG GF+++++ T G +++ L L WL WP+++ +
Sbjct: 136 LAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWL--WPEKLRFFQAEIAKRRD 193
Query: 210 QQFRVVALFRISP-FPYTIFNYAVTVTEIKFNPYLCGSIAGMIPEAFIYIYSG------R 262
+ + RI+P P N + + +I F+ + ++ G++P ++I + +G R
Sbjct: 194 RLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASYITVRAGLALGDLR 253
Query: 263 LIRTLADMK 271
++ L D K
Sbjct: 254 SVKDLYDFK 262
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,430,751
Number of extensions: 302552
Number of successful extensions: 789
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 786
Number of HSP's successfully gapped: 9
Length of query: 346
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 247
Effective length of database: 8,392,385
Effective search space: 2072919095
Effective search space used: 2072919095
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)