Os03g0370600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hydrophobic protein LTI6A (Low temperature-induced protein 6A).
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Os03g0370600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hydrophobic protein LTI6A (Low temperature-induced protein 6A).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.47 | 0.509 | 6.44 | -0.191 | 1.32 | -2.94 | 0.542 | 2.71 | -0.281 | 4.73 | 39.52 | 966 | 9.8 | 17.2 |
| 120.36 | 0.511 | 6.4 | 0.13 | 1.28 | -2.84 | 1.41 | -- | -0.173 | 4.63 | 41.8 | 1023 | 9.67 | 16.8 |
| 115.37 | 0.5 | 6.41 | -0.201 | 1.65 | -3.04 | -- | 3.01 | -0.178 | 4.44 | 43.04 | 958 | 10.6 | 16.4 |
| 121.93 | 0.514 | 6.4 | 0.136 | 1.85 | -3.29 | -- | -- | -0.169 | 4.62 | 41.9 | 965 | 11.4 | 15.5 |
| 136.36 | 0.544 | 6.45 | -0.0659 | -- | -2.29 | -- | 1.05 | -0.327 | -- | 48.34 | 1584 | 10.8 | 15.8 |
| 191.26 | 0.648 | 6.33 | 0.702 | 0.517 | -- | 1.53 | -- | 0.119 | 5.06 | -- | -- | -- | -- |
| 195.42 | 0.655 | 6.33 | 0.703 | 0.562 | -- | -- | -- | 0.113 | 6.23 | -- | -- | -- | -- |
| 134.03 | 0.539 | 6.43 | 0.157 | -- | -2.25 | -- | -- | -0.177 | -- | 73.63 | 1522 | 11.6 | 15.5 |
| 122.08 | 0.515 | 6.39 | -- | 1.96 | -3.44 | -- | -- | -0.197 | 4.54 | 42.85 | 965 | 11.3 | 15.5 |
| 211.77 | 0.68 | 6.34 | 0.719 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 208.46 | 0.675 | 6.35 | -- | 0.572 | -- | -- | -- | 0.0346 | 6.16 | -- | -- | -- | -- |
| 134.05 | 0.539 | 6.42 | -- | -- | -2.33 | -- | -- | -0.205 | -- | 97.74 | 1493 | 11.7 | 15.8 |
| 225.4 | 0.701 | 6.36 | -- | -- | -- | -- | -- | 0.0455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 3 | 127.59 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 19 | 128.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 26 | 128.94 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 37 | 129.21 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 127 | 130.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 131 | 130.53 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 153 | 130.74 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 344 | 132.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 387 | 132.65 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 17 |
| 467 | 133.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 613 | 134.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 9 |
| 622 | 134.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 650 | 134.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 709 | 134.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 916 | 135.32 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 943 | 135.41 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |