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Os03g0369800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Novel plant SNARE 13 (AtNPSN13).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0161) R2 : 0.52
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.88 (0.0398) R2dC : 0.517 R2C : 0.511
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.091 (0.0339) R2dN8 : 0.00981 R2N8 : 0.00371
σ : 0.304
deviance : 42.17
__
_____
C
peak time of C : 21.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.87 0.281 12.7 0.401 0.856 -0.711 0.171 0.169 0.224 20.4 9.52 19 -- --
35.89 0.279 12.7 0.377 0.858 -0.71 0.153 -- 0.217 20.4 7.903 19 -- --
35.95 0.279 12.7 0.386 0.857 -0.712 -- 0.0991 0.221 20.4 8.871 19 -- --
35.96 0.279 12.7 0.373 0.858 -0.711 -- -- 0.218 20.4 8.411 19 -- --
75.9 0.408 12.6 0.425 -- -0.839 -- 0.287 0.234 -- 14.15 9 -- --
40.63 0.299 12.7 0.239 0.88 -- 0.174 -- 0.117 21.3 -- -- -- --
40.74 0.299 12.7 0.233 0.879 -- -- -- 0.117 21.3 -- -- -- --
75.97 0.406 12.6 0.388 -- -0.825 -- -- 0.224 -- 13.83 3 -- --
39.23 0.293 12.7 -- 0.851 -0.532 -- -- 0.154 20.7 12.67 9 -- --
85.82 0.433 12.7 0.237 -- -- -- -- 0.113 -- -- -- -- --
42.17 0.304 12.7 -- 0.88 -- -- -- 0.091 21.3 -- -- -- --
79.64 0.416 12.6 -- -- -0.708 -- -- 0.167 -- 14.49 2 -- --
87.3 0.436 12.7 -- -- -- -- -- 0.087 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.66 temperature 15 30 > th dose dependent rect. 4 14
2 33.68 temperature 10 270 > th dose dependent rect. 3 13
6 33.87 temperature 15 10 > th dose dependent rect. 10 23
11 34.08 temperature 10 270 > th dose dependent rect. 10 21
16 34.23 atmosphere 1015 10 < th dose dependent rect. 12 20
19 34.28 temperature 10 720 > th dose dependent rect. 19 21
23 34.34 temperature 15 10 > th dose dependent rect. 12 21
37 34.41 temperature 10 720 > th dose dependent rect. 19 12
42 34.44 temperature 20 30 > th dose dependent rect. 1 17
81 34.66 temperature 15 720 > th dose dependent rect. 4 3
118 34.87 temperature 20 30 > th dose dependent rect. 23 19
138 34.97 atmosphere 1005 10 > th dose dependent sin 18 NA
145 35.00 temperature 30 720 > th dose independent rect. 11 3
146 35.00 temperature 30 270 < th dose independent rect. 6 13
149 35.01 temperature 10 720 > th dose dependent rect. 1 6
168 35.06 temperature 15 30 > th dose dependent rect. 19 23
181 35.10 atmosphere 995 30 > th dose dependent rect. 7 23
199 35.15 temperature 30 270 < th dose independent rect. 5 22
230 35.21 temperature 25 10 > th dose independent rect. 1 17
238 35.22 temperature 10 720 > th dose dependent rect. 19 16
243 35.23 temperature 15 10 > th dose dependent rect. 23 23
244 35.24 temperature 10 720 > th dose dependent rect. 23 8
259 35.27 temperature 30 720 < th dose independent rect. 7 3
273 35.29 temperature 30 30 < th dose dependent rect. 7 23
318 35.35 temperature 20 30 > th dose dependent rect. 21 21
326 35.37 atmosphere 995 90 > th dose dependent rect. 7 21
337 35.40 temperature 30 720 < th dose dependent rect. 22 12
340 35.40 temperature 15 10 > th dose dependent rect. 21 23
365 35.44 temperature 20 720 > th dose dependent rect. 4 1
381 35.47 temperature 25 10 > th dose independent rect. 1 7
410 35.51 atmosphere 1005 720 > th dose dependent rect. 7 12
413 35.52 temperature 15 270 > th dose dependent sin 1 NA
417 35.52 atmosphere 995 90 > th dose dependent rect. 8 15
422 35.53 atmosphere 1010 10 < th dose dependent sin 17 NA
423 35.53 temperature 30 270 < th dose dependent rect. 5 8
424 35.53 atmosphere 1010 10 < th dose dependent rect. 12 10
426 35.53 temperature 25 720 < th dose dependent rect. 22 18
458 35.57 temperature 30 90 < th dose dependent rect. 7 8
485 35.59 temperature 15 270 > th dose dependent rect. 1 23
488 35.60 temperature 10 720 > th dose dependent sin 9 NA
491 35.60 temperature 20 10 > th dose dependent rect. 23 21
509 35.62 atmosphere 995 720 > th dose dependent rect. 7 12
537 35.65 temperature 30 720 < th dose dependent rect. 22 15
539 35.66 temperature 30 270 < th dose dependent rect. 6 5
567 35.68 temperature 30 270 < th dose dependent rect. 7 2
588 35.70 radiation 1 30 > th dose independent rect. 12 20
594 35.70 atmosphere 1010 90 < th dose dependent rect. 13 10
595 35.70 atmosphere 1015 270 < th dose dependent rect. 11 11
634 35.72 atmosphere 1000 10 > th dose dependent rect. 8 19
675 35.75 temperature 10 720 > th dose dependent rect. 10 6
704 35.77 temperature 30 720 < th dose dependent sin 8 NA
724 35.79 temperature 30 4320 < th dose independent rect. 2 10
742 35.80 temperature 30 4320 < th dose independent rect. 4 8
745 35.80 temperature 30 4320 < th dose independent rect. 20 16
758 35.81 temperature 30 4320 > th dose independent rect. 11 1
759 35.81 temperature 30 4320 < th dose independent rect. 11 1
772 35.81 temperature 10 270 > th dose dependent rect. 10 12
788 35.82 temperature 30 4320 > th dose independent rect. 8 4
790 35.82 temperature 30 4320 < th dose independent rect. 7 5
805 35.82 temperature 30 4320 > th dose dependent rect. 10 2
828 35.83 temperature 30 270 < th dose dependent rect. 6 15
833 35.83 temperature 30 270 < th dose dependent rect. 5 22
861 35.86 temperature 30 720 < th dose independent rect. 22 14
875 35.86 temperature 20 10 > th dose dependent rect. 1 21
877 35.86 atmosphere 995 270 > th dose dependent rect. 5 21
880 35.87 temperature 20 270 > th dose independent rect. 3 13
896 35.87 temperature 15 270 > th dose dependent rect. 23 23
904 35.88 temperature 20 270 > th dose dependent rect. 10 6
911 35.88 atmosphere 1005 10 > th dose dependent rect. 8 15
925 35.89 temperature 10 10 > th dose dependent no NA NA
927 35.89 temperature 30 4320 > th dose dependent rect. 8 4
948 35.89 temperature 15 10 > th dose dependent rect. 1 23
1000 35.92 temperature 30 720 > th dose independent sin 5 NA