BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0369800 Os03g0369800|AK064875
         (275 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17440.1  | chr3:5969909-5972290 REVERSE LENGTH=270            378   e-105
AT1G48240.1  | chr1:17809223-17811656 REVERSE LENGTH=266          370   e-103
AT2G35190.1  | chr2:14831087-14832979 FORWARD LENGTH=266          305   2e-83

>AT3G17440.1 | chr3:5969909-5972290 REVERSE LENGTH=270
          Length = 269

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/270 (71%), Positives = 234/270 (86%), Gaps = 8/270 (2%)

Query: 1   MASDVPMSPELEQIDGEVQDIFRALQNGFQKMDKIKDSSRQAKQLEDLTAKMKECKRLIK 60
           MAS++PMSP+LEQI GE++D FRAL NGFQ++DKIKDS+RQ+KQLE+LT KM+ECKRL+K
Sbjct: 1   MASNLPMSPQLEQIHGEIRDHFRALANGFQRLDKIKDSTRQSKQLEELTDKMRECKRLVK 60

Query: 61  EFDRILKDEESNNPPEVHKQLNDRKQYMIKELNSYVTLRKTYQSSLGNNNKRVELFDMGA 120
           EFDR LKDEE+ N PEV+KQLND KQ MIKELNSYV LRKTY S+LGN  K+VELFDMGA
Sbjct: 61  EFDRELKDEEARNSPEVNKQLNDEKQSMIKELNSYVALRKTYMSTLGN--KKVELFDMGA 118

Query: 121 G-SSEPAAEDNIQIASAMTNQQLMDAGREQMTQTDQAIDRSKMVVAQTIETGTQTASALS 179
           G S EP AE+N+Q+AS+M+NQ+L+DAG ++M +TDQAI+RSK VV QT+E GTQTA+ L 
Sbjct: 119 GVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLK 178

Query: 180 QQTEQMKRIGNELDTVHFSLKKASQLVKEIGRQVATDKCIMALLFLIVCGVIAIIVVKIV 239
            QT+QM R+ N LDT+ FS+KKASQLVKEIGRQVATDKCIM  LFLIVCGV+AII+VKIV
Sbjct: 179 GQTDQMGRVVNHLDTIQFSIKKASQLVKEIGRQVATDKCIMGFLFLIVCGVVAIIIVKIV 238

Query: 240 NPHNKNIRDIPGLAPPAQNFQISNRRLLSV 269
           NP+NK+IRDIPGLAPPAQ     +R+LL +
Sbjct: 239 NPNNKDIRDIPGLAPPAQ-----SRKLLYL 263



>AT1G48240.1 | chr1:17809223-17811656 REVERSE LENGTH=266
          Length = 265

 Score =  370 bits (949), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/268 (72%), Positives = 230/268 (85%), Gaps = 8/268 (2%)

Query: 1   MASDVPMSPELEQIDGEVQDIFRALQNGFQKMDKIKDSSRQAKQLEDLTAKMKECKRLIK 60
           MAS++PMSP LEQI GE++D FRAL NGFQ++DKIKDSSRQ+KQLE+L  KM++CKRL+K
Sbjct: 1   MASELPMSPHLEQIHGEIRDHFRALANGFQRLDKIKDSSRQSKQLEELAEKMRDCKRLVK 60

Query: 61  EFDRILKDEESNNPPEVHKQLNDRKQYMIKELNSYVTLRKTYQSSLGNNNKRVELFDMGA 120
           EFDR LKD E+ N P+V+KQLND KQ MIKELNSYV LRKTY ++LGN  K+VELFD GA
Sbjct: 61  EFDRELKDGEARNSPQVNKQLNDEKQSMIKELNSYVALRKTYLNTLGN--KKVELFDTGA 118

Query: 121 G-SSEPAAEDNIQIASAMTNQQLMDAGREQMTQTDQAIDRSKMVVAQTIETGTQTASALS 179
           G S EP AE+N+Q+AS M+NQ+L+DAG ++M +TDQAI+RSK VV QT+E GTQTAS L 
Sbjct: 119 GVSGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLK 178

Query: 180 QQTEQMKRIGNELDTVHFSLKKASQLVKEIGRQVATDKCIMALLFLIVCGVIAIIVVKIV 239
            QT+QM R+ N+LDT+ FSLKKASQLVKEIGRQVATDKCIMA LFLIVCGVIAII+VKIV
Sbjct: 179 GQTDQMGRVVNDLDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIV 238

Query: 240 NPHNKNIRDIPGLAPPAQNFQISNRRLL 267
           NP+NK+IRDIPGLAPPAQ     +R+LL
Sbjct: 239 NPNNKDIRDIPGLAPPAQ-----SRKLL 261



>AT2G35190.1 | chr2:14831087-14832979 FORWARD LENGTH=266
          Length = 265

 Score =  305 bits (780), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 166/263 (63%), Positives = 207/263 (78%), Gaps = 10/263 (3%)

Query: 7   MSPELEQIDGEVQDIFRALQNGFQKMDKIKDSSRQAKQLEDLTAKMKECKRLIKEFDRIL 66
           +S EL +I+G++ DIFRAL NGFQK++KIKD++RQ++QLE+LT KM++CK LIK+FDR +
Sbjct: 7   VSEELAEIEGQINDIFRALSNGFQKLEKIKDANRQSRQLEELTDKMRDCKSLIKDFDREI 66

Query: 67  KDEESNNPPEVHKQLNDRKQYMIKELNSYVTLRKTYQSSLGNNNKRVELFDMGAGSSEPA 126
           K  ES N    ++ LNDR+Q M+KELNSYV L+K Y S+L +NNKRV+LFD   G  E  
Sbjct: 67  KSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFD---GPGEEH 123

Query: 127 AEDNIQIASAMTNQQLMDAGREQMTQTDQAIDRSKMVVAQTIETGTQTASALSQQTEQMK 186
            E+N+ +AS M+NQ+LMD G   M  TDQAI+R K +V +TI  GT T++AL  QTEQM 
Sbjct: 124 MEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTEQMS 183

Query: 187 RIGNELDTVHFSLKKASQLVKEIGRQVATDKCIMALLFLIVCGVIAIIVVKIVNPHNKNI 246
           R+ NELD++HFSLKKAS+LVKEIGRQVATDKCIMA LFLIV GVIAII+VKIVNP+NK+I
Sbjct: 184 RVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNKDI 243

Query: 247 RDIP--GLAPPAQNFQISNRRLL 267
           RDIP  GLAPPA      NRRLL
Sbjct: 244 RDIPGVGLAPPAM-----NRRLL 261



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.130    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,203,058
Number of extensions: 197225
Number of successful extensions: 895
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 892
Number of HSP's successfully gapped: 4
Length of query: 275
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 178
Effective length of database: 8,447,217
Effective search space: 1503604626
Effective search space used: 1503604626
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)