Os03g0366800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os03g0366800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.19 | 0.615 | 5.01 | 2.59 | 0.517 | 0.874 | 0.622 | 1.32 | 1.27 | 2.97 | 70.05 | 2963 | -- | -- |
| 173.38 | 0.613 | 4.99 | 2.73 | 0.514 | 0.974 | 0.714 | -- | 1.33 | 2.92 | 71.99 | 2889 | -- | -- |
| 172.46 | 0.612 | 5.01 | 2.56 | 0.524 | 0.849 | -- | 1.45 | 1.26 | 2.99 | 70.01 | 2966 | -- | -- |
| 174.62 | 0.615 | 5 | 2.72 | 0.592 | 0.963 | -- | -- | 1.31 | 2.8 | 71.57 | 2758 | -- | -- |
| 185.12 | 0.634 | 5 | 2.61 | -- | 1.01 | -- | 1.24 | 1.3 | -- | 70.8 | 3172 | -- | -- |
| 199.52 | 0.662 | 5.02 | 2.63 | 0.501 | -- | 0.486 | -- | 1.19 | 3.01 | -- | -- | -- | -- |
| 200.31 | 0.663 | 5.02 | 2.62 | 0.503 | -- | -- | -- | 1.19 | 3.04 | -- | -- | -- | -- |
| 186.58 | 0.636 | 4.99 | 2.71 | -- | 1.18 | -- | -- | 1.39 | -- | 73.92 | 3146 | -- | -- |
| 344.15 | 0.864 | 5 | -- | 0.528 | 1.3 | -- | -- | 1.35 | 1.7 | 75 | 7930 | -- | -- |
| 214.79 | 0.685 | 5.02 | 2.64 | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
| 381.3 | 0.913 | 5.09 | -- | 0.555 | -- | -- | -- | 0.896 | 3.06 | -- | -- | -- | -- |
| 260.27 | 0.751 | 5.11 | -- | -- | 2.34 | -- | -- | 0.798 | -- | 64.03 | 47520 | -- | -- |
| 398.92 | 0.932 | 5.09 | -- | -- | -- | -- | -- | 0.908 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.62 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 166.82 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 166.96 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 5 | 166.97 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 7 | 167.24 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 13 | 167.44 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 14 | 167.45 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 17 | 167.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 26 | 168.10 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 27 | 168.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 34 | 168.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 35 | 168.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 36 | 168.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 37 | 168.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 38 | 168.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 42 | 168.77 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 43 | 168.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 45 | 168.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 51 | 169.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 52 | 169.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 53 | 169.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 62 | 169.13 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 80 | 169.39 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 131 | 170.12 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 144 | 170.28 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 145 | 170.28 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 146 | 170.28 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 150 | 170.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 158 | 170.37 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 179 | 170.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 180 | 170.55 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 181 | 170.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 186 | 170.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 218 | 170.83 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 252 | 170.96 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 282 | 171.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 284 | 171.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 325 | 171.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 329 | 171.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 331 | 171.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 349 | 171.26 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 383 | 171.42 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 420 | 171.56 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 446 | 171.65 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 17 |
| 500 | 171.80 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 501 | 171.80 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 517 | 171.86 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 534 | 171.89 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 537 | 171.90 | humidity | 60.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 545 | 171.91 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 657 | 172.08 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 660 | 172.08 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 689 | 172.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 733 | 172.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 21 |
| 737 | 172.19 | humidity | 60.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 896 | 172.38 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 917 | 172.41 | humidity | 80.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 937 | 172.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |