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Os03g0353400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Poly(A)-binding protein C-terminal interacting protein 6.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.1 (0.0208) R2 : 0.745
β1 : 0.733 (0.0763) R2dD : 0.0537 R2D : 0.0228
β2 : 1.87 (0.0535) R2dC : 0.689 R2C : 0.66
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.357 (0.0445) R2dN8 : 0.0484 R2N8 : 0.0108
σ : 0.392
deviance : 69.92
__
_____
C
peak time of C : 16.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.52 0.356 14.1 0.853 1.87 0.6 0.543 -0.484 0.506 16.8 18.13 1241 -- --
58.01 0.355 14.1 0.826 1.87 0.606 0.521 -- 0.506 16.8 19.14 1240 -- --
58.29 0.356 14.1 0.854 1.87 0.6 -- -0.469 0.507 16.8 18.13 1240 -- --
58.71 0.357 14.1 0.81 1.87 0.596 -- -- 0.489 16.8 19.13 1240 -- --
238.36 0.723 14.1 0.647 -- -0.488 -- 0.0388 0.328 -- 18.13 1240 -- --
69.27 0.39 14.1 0.729 1.87 -- 0.492 -- 0.355 16.4 -- -- -- --
69.92 0.392 14.1 0.733 1.87 -- -- -- 0.357 16.4 -- -- -- --
238.37 0.722 14.1 0.645 -- -0.487 -- -- 0.327 -- 18.13 1240 -- --
75.1 0.404 14.1 -- 1.82 0.524 -- -- 0.413 16.6 19.57 1267 -- --
258.2 0.751 14.1 0.66 -- -- -- -- 0.308 -- -- -- -- --
84.09 0.429 14.1 -- 1.86 -- -- -- 0.276 16.4 -- -- -- --
249.32 0.738 14.1 -- -- -0.493 -- -- 0.256 -- 18.13 1240 -- --
269.68 0.767 14.1 -- -- -- -- -- 0.235 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.92 wind 7.0 720 < th dose independent rect. 17 4
2 54.25 wind 7.0 720 < th dose independent rect. 17 12
4 55.24 radiation 40.0 10 < th dose dependent rect. 6 21
5 55.37 temperature 20.0 270 > th dose independent rect. 5 19
8 55.84 wind 5.0 90 < th dose independent rect. 18 12
9 56.00 wind 9.0 720 < th dose independent rect. 9 20
16 56.31 wind 3.0 10 < th dose independent rect. 3 3
17 56.33 wind 3.0 90 < th dose independent rect. 3 2
20 56.34 wind 5.0 90 < th dose dependent rect. 3 2
21 56.39 wind 5.0 90 < th dose independent rect. 13 17
26 56.41 temperature 20.0 10 > th dose independent rect. 6 22
32 56.51 wind 5.0 90 < th dose independent rect. 15 15
33 56.53 wind 5.0 10 < th dose dependent rect. 3 3
35 56.55 radiation 30.0 10 < th dose independent rect. 6 21
38 56.59 wind 5.0 90 < th dose dependent rect. 2 4
51 56.73 precipitation 0.1 10 < th dose independent rect. 3 3
52 56.73 precipitation 0.1 10 < th dose dependent rect. 3 3
55 56.78 precipitation 0.1 90 < th dose independent rect. 3 2
56 56.78 precipitation 0.1 90 < th dose dependent rect. 3 2
67 56.89 radiation 20.0 14400 < th dose independent rect. 3 3
75 56.97 radiation 30.0 90 < th dose independent rect. 6 20
81 57.03 wind 9.0 270 < th dose dependent rect. 16 13
94 57.16 humidity 60.0 14400 > th dose independent rect. 3 4
101 57.20 wind 9.0 90 < th dose dependent rect. 18 12
126 57.43 atmosphere 1000.0 10 > th dose independent rect. 6 21
130 57.46 temperature 10.0 90 > th dose independent rect. 3 2
132 57.46 temperature 30.0 90 < th dose independent rect. 3 2
133 57.46 humidity 50.0 90 > th dose independent rect. 3 2
136 57.46 atmosphere 995.0 90 > th dose independent rect. 3 2
137 57.46 atmosphere 1010.0 90 < th dose independent rect. 3 2
139 57.46 radiation 20.0 90 < th dose independent rect. 3 2
143 57.46 radiation 40.0 90 < th dose dependent rect. 3 2
145 57.47 radiation 20.0 90 < th dose dependent rect. 3 2
147 57.48 radiation 1.0 90 < th dose independent rect. 3 2
169 57.61 wind 9.0 90 < th dose independent rect. 5 22
177 57.67 atmosphere 1005.0 90 > th dose independent rect. 3 2
181 57.70 radiation 10.0 10 < th dose independent rect. 3 3
185 57.74 atmosphere 1005.0 10 > th dose independent rect. 3 3
187 57.75 precipitation 0.1 720 < th dose independent rect. 17 12
189 57.75 precipitation 0.1 720 < th dose dependent rect. 17 12
191 57.76 temperature 10.0 10 > th dose independent rect. 3 3
193 57.76 temperature 30.0 10 < th dose independent rect. 3 3
194 57.76 humidity 50.0 10 > th dose independent rect. 3 3
197 57.76 atmosphere 995.0 10 > th dose independent rect. 3 3
198 57.76 atmosphere 1010.0 10 < th dose independent rect. 3 3
207 57.76 temperature 10.0 10 > th dose dependent rect. 3 3
221 57.88 wind 9.0 720 < th dose independent rect. 17 20
224 57.89 wind 9.0 10 < th dose independent rect. 6 21
228 57.91 atmosphere 1000.0 90 > th dose dependent rect. 3 2
254 57.96 humidity 50.0 90 > th dose dependent rect. 3 2
290 58.02 radiation 40.0 10 < th dose dependent rect. 3 3
294 58.04 atmosphere 1015.0 10 < th dose independent rect. 6 21
300 58.08 temperature 15.0 270 > th dose independent rect. 3 23
301 58.09 atmosphere 1015.0 1440 < th dose independent rect. 3 4
302 58.09 temperature 10.0 90 > th dose dependent rect. 6 20
318 58.12 humidity 60.0 90 > th dose independent rect. 17 13
352 58.18 temperature 10.0 10 > th dose dependent rect. 6 21
366 58.22 temperature 10.0 90 > th dose dependent rect. 5 22
368 58.23 wind 9.0 1440 < th dose independent rect. 3 4
369 58.23 temperature 10.0 1440 > th dose independent rect. 3 4
372 58.23 temperature 30.0 1440 < th dose independent rect. 3 4
376 58.23 humidity 50.0 1440 > th dose independent rect. 3 4
383 58.23 atmosphere 995.0 1440 > th dose independent rect. 3 4
384 58.23 radiation 40.0 1440 < th dose independent rect. 3 4
389 58.23 temperature 10.0 1440 > th dose independent rect. 7 20
397 58.24 atmosphere 1000.0 10 > th dose dependent rect. 3 3
399 58.25 atmosphere 1015.0 90 < th dose independent rect. 5 22
404 58.26 humidity 50.0 720 > th dose dependent rect. 20 5
407 58.28 temperature 30.0 90 < th dose dependent rect. 3 2
412 58.31 wind 9.0 720 < th dose independent rect. 11 9
421 58.36 radiation 40.0 720 < th dose independent rect. 5 4
427 58.40 precipitation 0.1 10 < th dose independent rect. 6 21
429 58.40 precipitation 0.1 10 < th dose dependent rect. 6 21
438 58.44 wind 9.0 720 < th dose independent rect. 8 13
442 58.46 wind 1.0 720 > th dose independent rect. 17 3
443 58.46 wind 9.0 720 < th dose independent rect. 9 11
451 58.47 temperature 30.0 90 < th dose independent rect. 17 13
452 58.47 wind 9.0 720 < th dose independent rect. 8 15
454 58.48 temperature 10.0 720 > th dose independent rect. 5 12
455 58.48 temperature 10.0 720 > th dose independent rect. 17 12
456 58.48 atmosphere 1015.0 720 < th dose independent rect. 5 12
457 58.48 radiation 30.0 720 < th dose independent rect. 17 12
460 58.49 precipitation 0.1 720 < th dose independent rect. 17 4
463 58.49 precipitation 0.1 720 < th dose dependent rect. 17 4
465 58.50 humidity 50.0 10 > th dose dependent rect. 3 3
478 58.58 wind 9.0 10 < th dose dependent rect. 15 15
479 58.58 wind 7.0 90 < th dose dependent rect. 13 17
485 58.61 wind 1.0 270 > th dose independent rect. 1 3
494 58.64 radiation 30.0 270 < th dose independent rect. 20 13
495 58.64 precipitation 0.1 720 < th dose independent rect. 9 20
497 58.64 precipitation 0.1 720 < th dose dependent rect. 9 20
536 58.71 humidity 70.0 720 > th dose independent rect. 5 3
541 58.72 temperature 10.0 720 > th dose independent rect. 17 4
542 58.72 radiation 30.0 720 < th dose independent rect. 17 4
545 58.72 temperature 10.0 720 > th dose independent rect. 21 20
549 58.73 wind 3.0 43200 < th dose dependent rect. 4 1
553 58.75 temperature 15.0 270 > th dose independent rect. 20 13
560 58.77 wind 7.0 43200 < th dose dependent rect. 4 2
571 58.80 wind 9.0 720 < th dose independent rect. 2 18
572 58.80 atmosphere 1015.0 90 < th dose dependent rect. 3 2
578 58.81 wind 9.0 720 < th dose independent rect. 5 4
580 58.81 temperature 10.0 720 > th dose independent rect. 5 4
581 58.81 humidity 50.0 720 > th dose independent rect. 5 4
582 58.81 atmosphere 995.0 720 > th dose independent rect. 5 4
583 58.81 atmosphere 1015.0 720 < th dose independent rect. 5 4
584 58.81 precipitation 0.1 270 < th dose independent rect. 9 11
585 58.81 wind 1.0 270 > th dose independent rect. 4 20
586 58.81 temperature 10.0 720 > th dose independent rect. 9 20
587 58.81 precipitation 0.1 270 < th dose dependent rect. 9 11
618 58.84 precipitation 0.1 270 < th dose independent rect. 1 13
621 58.84 precipitation 0.1 270 < th dose dependent rect. 1 13
624 58.85 temperature 30.0 720 < th dose independent rect. 5 4
626 58.86 temperature 20.0 270 > th dose independent rect. 21 3
656 58.95 temperature 20.0 720 > th dose independent rect. 13 4
680 58.98 precipitation 0.1 720 < th dose independent rect. 5 4
687 58.98 precipitation 0.1 720 < th dose dependent rect. 5 4
705 59.02 wind 1.0 43200 > th dose dependent rect. 4 2
756 59.12 radiation 40.0 720 < th dose dependent rect. 17 12
782 59.15 radiation 30.0 1440 < th dose dependent rect. 9 1
841 59.25 precipitation 0.1 720 < th dose independent rect. 17 20
844 59.25 precipitation 0.1 720 < th dose dependent rect. 17 20
860 59.29 atmosphere 1015.0 720 < th dose independent rect. 17 3
872 59.31 temperature 30.0 270 < th dose independent rect. 20 13
875 59.31 radiation 1.0 1440 > th dose dependent rect. 9 1
940 59.41 wind 3.0 43200 > th dose dependent rect. 7 1
964 59.43 precipitation 0.1 720 < th dose independent rect. 5 12
969 59.43 precipitation 0.1 720 < th dose dependent rect. 5 12
981 59.46 wind 7.0 43200 < th dose dependent rect. 1 5