Os03g0347800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidyl-tRNA hydrolase family protein.
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Os03g0347800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidyl-tRNA hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.04 | 0.525 | 5.98 | 2.18 | 1.25 | -1.89 | 1.28 | 1.43 | 0.338 | 7.07 | 18.72 | 257 | -- | -- |
| 126.3 | 0.523 | 6.01 | 1.96 | 1.25 | -1.95 | 1.05 | -- | 0.263 | 7.12 | 17.51 | 251 | -- | -- |
| 128.88 | 0.529 | 5.99 | 2.07 | 1.26 | -1.89 | -- | 0.702 | 0.291 | 6.91 | 18.1 | 273 | -- | -- |
| 129.09 | 0.529 | 6.01 | 1.97 | 1.24 | -1.94 | -- | -- | 0.273 | 6.93 | 17.53 | 274 | -- | -- |
| 184.97 | 0.633 | 5.97 | 2.47 | -- | -2.7 | -- | 1.65 | 0.527 | -- | 19.97 | 375 | -- | -- |
| 177.92 | 0.625 | 6.07 | 1.49 | 1.83 | -- | 1.32 | -- | -0.0458 | 6.25 | -- | -- | -- | -- |
| 182.16 | 0.632 | 6.07 | 1.5 | 1.84 | -- | -- | -- | -0.0509 | 6.18 | -- | -- | -- | -- |
| 185.74 | 0.635 | 6 | 2.18 | -- | -2.72 | -- | -- | 0.443 | -- | 18.87 | 379 | -- | -- |
| 219.68 | 0.69 | 6.07 | -- | 1.42 | -1.14 | -- | -- | -0.0383 | 6.38 | 19.87 | 330 | -- | -- |
| 357.01 | 0.883 | 6.1 | 1.56 | -- | -- | -- | -- | -0.0103 | -- | -- | -- | -- | -- |
| 241.85 | 0.727 | 6.11 | -- | 1.86 | -- | -- | -- | -0.218 | 6.14 | -- | -- | -- | -- |
| 291.18 | 0.795 | 6.1 | -- | -- | -2.09 | -- | -- | -0.0109 | -- | 24.2 | 365 | -- | -- |
| 420.86 | 0.958 | 6.14 | -- | -- | -- | -- | -- | -0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 2 | 122.67 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 6 | 123.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 29 | 125.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 40 | 126.35 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 42 | 126.38 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 75 | 127.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 96 | 128.67 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 99 | 128.76 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 117 | 129.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 147 | 130.19 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 207 | 131.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 217 | 131.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 230 | 131.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 245 | 131.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 258 | 131.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 389 | 132.60 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 444 | 132.83 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 469 | 132.90 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 805 | 134.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 815 | 134.07 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 858 | 134.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 861 | 134.20 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 883 | 134.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |