BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0347800 Os03g0347800|AK073756
         (186 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19830.1  | chr5:6703383-6705125 FORWARD LENGTH=220            179   9e-46
AT1G18440.1  | chr1:6345994-6347686 FORWARD LENGTH=289            165   1e-41
AT5G16140.1  | chr5:5270308-5271517 REVERSE LENGTH=241            156   7e-39
AT5G38290.2  | chr5:15303491-15305381 FORWARD LENGTH=251          150   3e-37

>AT5G19830.1 | chr5:6703383-6705125 FORWARD LENGTH=220
          Length = 219

 Score =  179 bits (453), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 84/116 (72%), Positives = 97/116 (83%)

Query: 57  VINPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVL 116
           V  PWLF+GLGNPG+KY+ TRHN+GF+MID+FA+S GI +    FKA+ G+G V  +PV+
Sbjct: 15  VHRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVI 74

Query: 117 LAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
           LAKPQTYMNLSGES GPLAAYYKLPLNRVLV  DDM LPCGVLRLQ KGG+G HNG
Sbjct: 75  LAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNG 130



>AT1G18440.1 | chr1:6345994-6347686 FORWARD LENGTH=289
          Length = 288

 Score =  165 bits (417), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 95/118 (80%)

Query: 60  PWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAK 119
           PWL VGLGNPG+KYQ TRHNVGF+M+D  A ++GIS+    FKALFG+G++  +P++LAK
Sbjct: 94  PWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAK 153

Query: 120 PQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNGSVDFI 177
           PQT+MNLSGESVG + ++YK+PL +VLV +DD+DLP G LRL PKGG+G HNG    I
Sbjct: 154 PQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSII 211



>AT5G16140.1 | chr5:5270308-5271517 REVERSE LENGTH=241
          Length = 240

 Score =  156 bits (394), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 88/113 (77%)

Query: 60  PWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAK 119
           PWL VGLGNPG KY  TRHNVGF+MID+ A+ +G+ +     KAL G G +E VP+LLAK
Sbjct: 45  PWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAK 104

Query: 120 PQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
           PQTYMN SGESVG LA++Y++PL  +L+ +D+M LP GVLRLQPKGG G HNG
Sbjct: 105 PQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNG 157



>AT5G38290.2 | chr5:15303491-15305381 FORWARD LENGTH=251
          Length = 250

 Score =  150 bits (379), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 85/113 (75%)

Query: 60  PWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAK 119
           PWL VGLGNPG KY  TRHN+GF+MID  A++  IS+     KAL G G V  VP+LL K
Sbjct: 55  PWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVK 114

Query: 120 PQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
           PQ YMN SGESVGPLAAYY++PL  +L+ +DDM L  GVLRLQPKGG+ +HNG
Sbjct: 115 PQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNG 167



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.325    0.141    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,825,313
Number of extensions: 141277
Number of successful extensions: 258
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 258
Number of HSP's successfully gapped: 4
Length of query: 186
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 93
Effective length of database: 8,556,881
Effective search space: 795789933
Effective search space used: 795789933
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 108 (46.2 bits)