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Os03g0340900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RSH1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0149) R2 : 0.335
β1 : -0.822 (0.0547) R2dD : 0.341 R2D : 0.289
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.155 (0.0319) R2dN8 : 0.046 R2N8 : -0.00637
σ : 0.281
deviance : 36.04
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.65 0.224 13 -0.828 0.505 -0.458 -0.382 1.05 -0.212 2.87 93.52 185 -- --
23.28 0.225 13 -0.817 0.539 -0.335 -0.139 -- -0.217 2.99 90.4 243 -- --
23.05 0.224 13 -0.818 0.513 -0.481 -- 0.75 -0.212 2.93 93.46 194 -- --
23.31 0.225 13 -0.809 0.546 -0.345 -- -- -0.221 3.03 90.45 239 -- --
30.63 0.258 13 -0.738 -- -0.563 -- 0.0464 -0.254 -- 85.15 1026 -- --
25.4 0.236 13 -0.847 0.42 -- -0.264 -- -0.167 2.37 -- -- -- --
25.65 0.237 13 -0.84 0.419 -- -- -- -0.165 2.41 -- -- -- --
30.33 0.257 13 -0.77 -- -0.549 -- -- -0.223 -- 81.54 1055 -- --
39.81 0.294 13 -- 0.613 -0.435 -- -- -0.132 3.32 87.17 261 -- --
36.04 0.281 13 -0.822 -- -- -- -- -0.155 -- -- -- -- --
44.25 0.311 13 -- 0.403 -- -- -- -0.0715 2.38 -- -- -- --
45.43 0.314 13 -- -- -0.666 -- -- -0.171 -- 85.15 1057 -- --
53.88 0.343 13 -- -- -- -- -- -0.0635 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.44 humidity 60.0 270 > th dose dependent rect. 21 10
2 20.52 humidity 70.0 90 > th dose dependent rect. 23 10
5 20.57 humidity 90.0 270 < th dose independent rect. 3 8
9 20.67 humidity 90.0 270 < th dose independent rect. 5 6
18 20.82 humidity 70.0 90 > th dose dependent sin 7 NA
20 20.89 humidity 80.0 90 < th dose independent rect. 20 17
23 20.93 humidity 90.0 270 < th dose independent rect. 7 3
32 20.99 humidity 90.0 90 < th dose dependent rect. 20 15
35 21.02 humidity 80.0 90 < th dose independent sin 7 NA
39 21.06 radiation 1.0 270 > th dose independent rect. 4 7
55 21.07 temperature 10.0 270 > th dose dependent rect. 11 19
56 21.08 humidity 80.0 90 > th dose independent sin 7 NA
73 21.19 temperature 20.0 270 > th dose independent rect. 11 19
78 21.20 humidity 80.0 270 > th dose independent rect. 22 9
93 21.25 humidity 80.0 90 < th dose independent rect. 1 12
97 21.27 radiation 1.0 270 > th dose independent rect. 7 3
102 21.27 temperature 10.0 90 > th dose dependent rect. 13 18
114 21.30 humidity 90.0 270 < th dose independent rect. 18 17
129 21.34 humidity 90.0 90 < th dose dependent sin 8 NA
180 21.45 radiation 1.0 270 > th dose independent sin 7 NA
187 21.47 precipitation 0.1 270 < th dose independent rect. 6 5
188 21.47 humidity 90.0 270 < th dose independent rect. 11 6
190 21.47 precipitation 0.1 270 < th dose dependent rect. 6 5
199 21.49 precipitation 0.1 270 < th dose independent rect. 7 3
203 21.49 wind 9.0 270 < th dose independent rect. 11 19
204 21.49 precipitation 0.1 270 < th dose dependent rect. 7 3
205 21.50 temperature 10.0 270 > th dose independent rect. 6 5
206 21.50 atmosphere 995.0 270 > th dose independent rect. 6 5
207 21.50 atmosphere 1015.0 270 < th dose independent rect. 6 5
220 21.50 temperature 10.0 270 > th dose independent rect. 11 19
225 21.51 wind 9.0 270 < th dose independent rect. 6 5
229 21.51 wind 9.0 270 < th dose independent rect. 10 21
232 21.52 temperature 10.0 270 > th dose independent rect. 7 3
233 21.52 atmosphere 995.0 270 > th dose independent rect. 7 3
234 21.52 atmosphere 1015.0 270 < th dose independent rect. 7 3
236 21.52 temperature 10.0 270 > th dose independent rect. 10 21
240 21.53 wind 9.0 270 < th dose independent rect. 7 3
243 21.53 radiation 1.0 270 > th dose independent rect. 11 7
254 21.54 humidity 50.0 270 > th dose independent rect. 7 3
255 21.54 humidity 90.0 10 < th dose independent rect. 7 6
261 21.55 radiation 1.0 270 < th dose independent sin 7 NA
276 21.56 humidity 50.0 270 > th dose independent rect. 6 5
282 21.56 radiation 10.0 270 < th dose dependent sin 9 NA
302 21.59 radiation 10.0 270 < th dose independent rect. 22 9
322 21.61 humidity 80.0 90 > th dose dependent rect. 23 15
333 21.63 wind 1.0 90 > th dose independent rect. 7 6
351 21.65 radiation 20.0 270 < th dose dependent rect. 22 9
360 21.66 precipitation 0.1 270 < th dose independent rect. 17 18
366 21.66 precipitation 0.1 270 < th dose dependent rect. 17 18
367 21.67 temperature 30.0 270 < th dose independent rect. 7 3
376 21.67 radiation 40.0 90 < th dose independent rect. 13 18
408 21.71 wind 1.0 270 > th dose independent rect. 7 3
429 21.72 radiation 40.0 270 < th dose independent rect. 7 2
448 21.73 precipitation 0.1 270 < th dose independent rect. 11 19
455 21.73 precipitation 0.1 270 < th dose dependent rect. 11 19
456 21.74 temperature 20.0 270 > th dose independent rect. 11 6
457 21.74 humidity 80.0 10 > th dose independent rect. 24 9
460 21.74 wind 9.0 90 < th dose independent rect. 13 18
472 21.75 atmosphere 995.0 270 > th dose independent rect. 11 19
492 21.77 temperature 10.0 90 > th dose independent rect. 13 18
497 21.77 radiation 40.0 270 < th dose dependent rect. 15 10
505 21.78 wind 9.0 270 < th dose independent rect. 11 6
509 21.78 temperature 10.0 270 > th dose dependent rect. 11 6
514 21.79 temperature 30.0 270 < th dose independent rect. 6 5
544 21.80 wind 9.0 270 < th dose independent rect. 17 18
546 21.80 radiation 1.0 270 > th dose independent rect. 10 20
559 21.81 radiation 20.0 270 < th dose independent rect. 15 10
561 21.81 precipitation 0.1 270 < th dose independent rect. 10 21
568 21.81 precipitation 0.1 270 < th dose dependent rect. 10 21
572 21.82 atmosphere 1015.0 270 < th dose independent rect. 11 6
574 21.82 precipitation 0.1 270 < th dose independent rect. 11 6
588 21.82 temperature 10.0 270 > th dose independent rect. 17 18
594 21.82 precipitation 0.1 270 < th dose dependent rect. 11 6
609 21.83 wind 1.0 270 > th dose independent rect. 16 9
664 21.86 humidity 50.0 270 > th dose independent rect. 17 18
692 21.88 temperature 10.0 270 > th dose dependent rect. 7 3
704 21.89 humidity 80.0 90 > th dose independent rect. 23 12
749 21.91 precipitation 0.1 90 < th dose independent rect. 13 18
750 21.91 atmosphere 995.0 270 > th dose independent rect. 10 21
758 21.91 precipitation 0.1 90 < th dose dependent rect. 13 18
776 21.93 temperature 20.0 10 > th dose independent rect. 13 18
806 21.95 atmosphere 995.0 270 > th dose independent rect. 17 18
853 21.98 radiation 10.0 10 > th dose independent sin 5 NA
857 21.98 wind 9.0 270 < th dose independent rect. 1 15
862 21.98 temperature 10.0 270 > th dose dependent rect. 22 9
894 22.00 wind 1.0 10 > th dose independent rect. 7 6
901 22.00 humidity 90.0 90 < th dose dependent rect. 7 4
912 22.01 atmosphere 995.0 270 > th dose independent rect. 11 6
919 22.01 radiation 40.0 10 < th dose independent rect. 13 18
936 22.02 wind 9.0 270 < th dose independent rect. 16 9
968 22.04 temperature 10.0 270 > th dose independent rect. 16 9
972 22.04 temperature 10.0 270 > th dose independent rect. 1 15
973 22.04 atmosphere 1015.0 270 < th dose independent rect. 1 15
999 22.05 humidity 90.0 90 < th dose dependent rect. 5 6