Os03g0335100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0335100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.18 | 0.434 | 2.89 | -0.269 | 0.117 | -0.103 | -1.02 | 1.14 | 0.11 | 4.67 | 72.47 | 205 | -- | -- |
| 87.68 | 0.439 | 2.88 | -0.198 | 0.115 | -0.093 | -0.407 | -- | 0.131 | 5.9 | 72.99 | 128 | -- | -- |
| 86.91 | 0.434 | 2.89 | -0.238 | 0.0685 | -0.104 | -- | 1.03 | 0.122 | 5.35 | 68.58 | 198 | -- | -- |
| 88.01 | 0.44 | 2.88 | -0.205 | 0.134 | -0.12 | -- | -- | 0.131 | 4.6 | 72 | 128 | -- | -- |
| 87.13 | 0.435 | 2.88 | -0.23 | -- | -0.0742 | -- | 0.821 | 0.13 | -- | 68.62 | 198 | -- | -- |
| 88.27 | 0.44 | 2.88 | -0.183 | 0.0754 | -- | -0.416 | -- | 0.131 | 7.24 | -- | -- | -- | -- |
| 88.71 | 0.441 | 2.88 | -0.191 | 0.0762 | -- | -- | -- | 0.133 | 8.29 | -- | -- | -- | -- |
| 88.64 | 0.44 | 2.88 | -0.196 | -- | -0.0625 | -- | -- | 0.134 | -- | 72 | 128 | -- | -- |
| 89.11 | 0.442 | 2.87 | -- | 0.121 | -0.107 | -- | -- | 0.154 | 4.86 | 72.15 | 129 | -- | -- |
| 89.03 | 0.441 | 2.88 | -0.191 | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
| 89.67 | 0.443 | 2.87 | -- | 0.0754 | -- | -- | -- | 0.154 | 8.48 | -- | -- | -- | -- |
| 89.65 | 0.442 | 2.87 | -- | -- | -0.0583 | -- | -- | 0.156 | -- | 72 | 128 | -- | -- |
| 89.99 | 0.443 | 2.88 | -- | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.12 | humidity | 60 | 720 | < th | dose independent | rect. | 8 | 2 |
| 29 | 76.35 | humidity | 60 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 73 | 77.03 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 75 | 77.17 | humidity | 60 | 4320 | > th | dose independent | rect. | 24 | 9 |
| 135 | 77.24 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 197 | 77.25 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 300 | 77.27 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 374 | 77.39 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 396 | 77.60 | humidity | 60 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 397 | 77.61 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 478 | 77.76 | humidity | 60 | 4320 | > th | dose independent | rect. | 20 | 13 |
| 514 | 77.81 | humidity | 80 | 720 | < th | dose independent | rect. | 3 | 3 |
| 517 | 77.81 | humidity | 80 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 520 | 77.82 | humidity | 80 | 270 | < th | dose independent | rect. | 5 | 1 |
| 528 | 77.82 | humidity | 80 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 536 | 77.85 | humidity | 60 | 4320 | > th | dose independent | rect. | 3 | 6 |
| 601 | 78.16 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 635 | 78.37 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 714 | 78.88 | radiation | 40 | 10 | > th | dose dependent | sin | 11 | NA |
| 742 | 79.04 | humidity | 60 | 10 | < th | dose independent | sin | 10 | NA |
| 763 | 79.15 | humidity | 60 | 10 | > th | dose independent | sin | 10 | NA |
| 827 | 79.48 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 933 | 79.58 | humidity | 90 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 968 | 79.91 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 6 |