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Os03g0330300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Viral attachment protein, fibre shaft repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.64 (0.0254) R2 : 0.464
β1 : -1.74 (0.096) R2dD : 0.428 R2D : 0.313
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.771 (0.0703) R2dE : 0.15 R2E : 0.0251
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0597 (0.0543) R2dN8 : 0.00188 R2N8 : 0.0102
σ : 0.476
deviance : 104.3
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 26.87
memory length : 1349
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
92.55 0.452 9.61 -1.7 0.464 0.821 0.05 0.155 0.114 10.1 27.77 1235 -- --
92.55 0.448 9.61 -1.71 0.478 0.839 0.0601 -- 0.106 10.1 27.56 1230 -- --
92.51 0.448 9.61 -1.63 0.47 0.813 -- 0.485 0.104 10.1 27.26 1231 -- --
92.48 0.448 9.62 -1.75 0.469 0.865 -- -- 0.0727 10.2 27.1 1231 -- --
104.19 0.475 9.61 -1.57 -- 0.698 -- 0.69 0.0894 -- 26.8 1351 -- --
123.37 0.521 9.62 -1.49 0.382 -- 0.129 -- 0.0681 8.96 -- -- -- --
123.41 0.52 9.62 -1.49 0.38 -- -- -- 0.0686 9.12 -- -- -- --
104.3 0.476 9.64 -1.74 -- 0.771 -- -- 0.0597 -- 26.87 1349 -- --
166.17 0.6 9.56 -- 0.446 0.577 -- -- 0.354 9.84 30.7 1171 -- --
131.75 0.536 9.63 -1.49 -- -- -- -- 0.0707 -- -- -- -- --
181.73 0.631 9.59 -- 0.38 -- -- -- 0.234 9.42 -- -- -- --
177.26 0.62 9.57 -- -- 0.503 -- -- 0.345 -- 30.6 1233 -- --
190.2 0.644 9.6 -- -- -- -- -- 0.236 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.07 radiation 20 14400 > th dose dependent rect. 16 1
15 92.31 humidity 70 14400 > th dose independent rect. 19 1
17 93.03 radiation 20 1440 > th dose independent rect. 16 15
18 93.30 radiation 30 14400 < th dose independent rect. 15 3
22 93.30 radiation 30 14400 < th dose independent rect. 15 12
32 93.34 humidity 70 14400 > th dose independent rect. 19 12
34 93.42 humidity 70 14400 < th dose independent rect. 18 2
50 93.46 radiation 20 1440 < th dose independent rect. 16 15
52 93.61 humidity 70 14400 > th dose independent rect. 19 9
56 93.65 humidity 70 14400 > th dose independent rect. 19 6
58 93.66 humidity 70 14400 > th dose independent rect. 19 4
62 93.70 humidity 70 14400 < th dose independent rect. 18 13
64 93.81 temperature 30 720 < th dose independent rect. 17 9
67 93.82 radiation 40 4320 > th dose dependent rect. 13 3
96 93.87 humidity 70 14400 < th dose independent rect. 18 4
108 93.90 temperature 25 720 > th dose dependent rect. 17 15
109 93.95 humidity 70 720 > th dose independent rect. 16 10
111 94.01 radiation 30 14400 > th dose independent rect. 15 17
113 94.05 radiation 10 1440 < th dose dependent rect. 18 12
134 94.20 radiation 1 1440 > th dose dependent rect. 18 12
144 94.25 radiation 40 1440 > th dose independent rect. 14 19
145 94.25 temperature 30 14400 > th dose dependent rect. 16 3
167 94.30 radiation 10 1440 > th dose dependent rect. 16 15
176 94.35 temperature 25 720 > th dose dependent rect. 17 6
179 94.37 radiation 30 1440 > th dose independent rect. 15 17
180 94.40 radiation 40 1440 > th dose independent rect. 14 2
203 94.45 radiation 10 1440 > th dose dependent rect. 16 2
215 94.46 radiation 20 1440 < th dose independent rect. 16 2
216 94.46 radiation 20 1440 < th dose independent rect. 16 13
229 94.47 radiation 20 1440 < th dose independent rect. 16 4
244 94.49 humidity 70 720 > th dose independent rect. 15 5
249 94.52 radiation 20 1440 > th dose independent rect. 16 1
263 94.52 temperature 25 720 > th dose dependent rect. 18 4
270 94.54 radiation 40 14400 < th dose dependent rect. 16 13
271 94.55 radiation 40 14400 < th dose dependent rect. 16 3
276 94.56 radiation 40 14400 < th dose dependent rect. 16 9
281 94.57 radiation 30 14400 > th dose independent rect. 15 2
332 94.61 radiation 40 1440 > th dose dependent sin 13 NA
336 94.62 radiation 30 1440 < th dose independent rect. 15 17
339 94.63 humidity 80 720 < th dose dependent rect. 18 3
359 94.68 temperature 30 720 < th dose independent rect. 17 2
360 94.69 temperature 25 1440 > th dose dependent rect. 16 1
373 94.76 temperature 25 1440 > th dose dependent rect. 15 4
388 94.77 temperature 30 14400 > th dose dependent sin 13 NA
389 94.79 radiation 40 1440 < th dose independent rect. 14 1
398 94.82 radiation 40 1440 < th dose independent rect. 14 4
399 94.82 radiation 40 1440 < th dose independent rect. 14 15
410 94.84 radiation 40 1440 < th dose independent rect. 14 6
428 94.87 temperature 25 1440 > th dose dependent rect. 13 10
429 94.88 wind 5 43200 > th dose independent rect. 11 1
504 94.97 radiation 40 1440 < th dose independent rect. 14 19
507 94.99 temperature 30 14400 > th dose independent rect. 16 3
547 95.03 temperature 30 14400 < th dose independent rect. 16 13
558 95.04 temperature 30 14400 < th dose independent rect. 16 3
561 95.04 temperature 30 14400 < th dose independent rect. 16 11
568 95.04 radiation 40 1440 < th dose dependent rect. 16 14
571 95.05 temperature 30 14400 < th dose independent rect. 16 9
598 95.09 temperature 30 1440 > th dose dependent sin 15 NA
600 95.09 temperature 25 14400 > th dose dependent rect. 22 1
618 95.11 radiation 1 1440 > th dose dependent rect. 4 2
639 95.14 temperature 30 1440 > th dose independent rect. 16 3
696 95.16 wind 5 43200 < th dose independent rect. 11 1
746 95.20 radiation 40 1440 < th dose dependent rect. 15 16
764 95.23 humidity 90 43200 > th dose independent rect. 9 2
782 95.26 temperature 30 1440 < th dose independent rect. 16 13
821 95.30 humidity 90 43200 > th dose dependent rect. 9 2
822 95.30 radiation 10 1440 < th dose dependent rect. 2 4
884 95.33 wind 5 43200 < th dose independent rect. 5 1
946 95.37 temperature 30 14400 > th dose independent sin 14 NA
947 95.37 humidity 70 1440 < th dose independent sin 14 NA
990 95.42 temperature 30 14400 < th dose independent sin 14 NA