Os03g0325600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain-like containing protein.
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Os03g0325600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Homeodomain-like containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.78 | 0.499 | 2.95 | -0.0214 | 0.207 | 2.29 | -0.514 | 4.16 | 0.0965 | 1.66 | 7.416 | 270 | -- | -- |
| 104.64 | 0.476 | 2.93 | -0.136 | 0.21 | 2.7 | -0.613 | -- | 0.0731 | 1.57 | 11.5 | 226 | -- | -- |
| 106.04 | 0.48 | 2.93 | -0.0664 | 0.272 | 3.39 | -- | 3.51 | 0.0959 | 0.79 | 11.49 | 302 | -- | -- |
| 105.72 | 0.479 | 2.93 | -0.118 | 0.215 | 2.69 | -- | -- | 0.0815 | 0.413 | 11.03 | 264 | -- | -- |
| 108.61 | 0.485 | 2.93 | -0.096 | -- | 3.42 | -- | 3.73 | 0.0844 | -- | 11.37 | 301 | -- | -- |
| 119.27 | 0.512 | 2.94 | -0.182 | 0.185 | -- | -0.401 | -- | 0.0597 | 0.228 | -- | -- | -- | -- |
| 119.94 | 0.513 | 2.94 | -0.165 | 0.187 | -- | -- | -- | 0.0622 | 23.7 | -- | -- | -- | -- |
| 108.46 | 0.485 | 2.93 | -0.126 | -- | 3.71 | -- | -- | 0.0786 | -- | 10.91 | 215 | -- | -- |
| 106.08 | 0.48 | 2.93 | -- | 0.214 | 2.72 | -- | -- | 0.0948 | 0.388 | 10.99 | 270 | -- | -- |
| 122.14 | 0.516 | 2.93 | -0.16 | -- | -- | -- | -- | 0.0644 | -- | -- | -- | -- | -- |
| 120.66 | 0.514 | 2.93 | -- | 0.185 | -- | -- | -- | 0.0806 | 23.7 | -- | -- | -- | -- |
| 108.88 | 0.486 | 2.93 | -- | -- | 3.74 | -- | -- | 0.0926 | -- | 10.96 | 211 | -- | -- |
| 122.82 | 0.517 | 2.93 | -- | -- | -- | -- | -- | 0.0822 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.06 | wind | 9.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 2 | 102.06 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 6 | 102.08 | wind | 9.0 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 7 | 102.14 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 3 |
| 18 | 104.64 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 30 | 104.64 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 55 | 105.16 | wind | 9.0 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 64 | 105.53 | wind | 9.0 | 270 | > th | dose independent | rect. | 18 | 20 |
| 111 | 107.20 | wind | 9.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 121 | 107.57 | wind | 9.0 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 140 | 107.96 | wind | 9.0 | 270 | > th | dose independent | sin | 8 | NA |
| 147 | 108.12 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 13 |
| 232 | 109.11 | wind | 9.0 | 30 | > th | dose independent | rect. | 13 | 13 |
| 304 | 109.72 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 9 |
| 370 | 109.93 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 379 | 110.02 | wind | 9.0 | 270 | < th | dose independent | sin | 9 | NA |
| 440 | 110.31 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 458 | 110.39 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 498 | 110.52 | wind | 9.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 568 | 110.73 | wind | 9.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 574 | 110.77 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 582 | 110.81 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 610 | 110.94 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 628 | 111.08 | wind | 9.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 651 | 111.17 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 655 | 111.18 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 680 | 111.32 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 16 |
| 737 | 111.52 | wind | 7.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 739 | 111.53 | wind | 7.0 | 720 | < th | dose independent | rect. | 5 | 9 |
| 764 | 111.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 765 | 111.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 822 | 111.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 823 | 111.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 850 | 111.81 | wind | 9.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 854 | 111.81 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 855 | 111.81 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 890 | 111.86 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 944 | 111.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 945 | 111.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 948 | 111.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 949 | 111.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 11 |