FiT-DB / Search/ Help/ Sample detail

Os03g0321300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.03 (0.0297) R2 : 0.346
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.682 (0.0772) R2dC : 0.112 R2C : 0.0517
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.787 (0.0624) R2dN8 : 0.295 R2N8 : 0.234
σ : 0.559
deviance : 142.74
__
_____
C
peak time of C : 6.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
116.06 0.506 9.18 -1.09 0.698 4.71 -0.904 -14.9 0.783 6.93 0.02887 1225 -- --
129.65 0.53 9.04 -0.628 0.694 0.455 -0.866 -- 0.712 6.86 2.266 49 -- --
118.13 0.506 9.18 -1.11 0.693 4.77 -- -15.2 0.785 6.93 0.05816 1210 -- --
129.37 0.53 9.04 -0.634 0.724 1.08 -- -- 0.73 6.93 2.246 1853 -- --
143.53 0.558 9.19 -1.08 -- 4.61 -- -14.5 0.798 -- -0.1458 1210 -- --
129.91 0.534 9.04 -0.62 0.691 -- -0.916 -- 0.713 6.86 -- -- -- --
132.07 0.538 9.04 -0.636 0.689 -- -- -- 0.716 6.84 -- -- -- --
153.68 0.577 9.06 -0.736 -- 0.897 -- -- 0.731 -- 1.676 1362 -- --
141.48 0.554 9.02 -- 0.689 0.698 -- -- 0.801 7 2.166 1836 -- --
156.93 0.585 9.06 -0.621 -- -- -- -- 0.729 -- -- -- -- --
142.74 0.559 9.03 -- 0.682 -- -- -- 0.787 6.9 -- -- -- --
165.45 0.599 9.04 -- -- 0.498 -- -- 0.818 -- 1.463 1215 -- --
167.11 0.603 9.04 -- -- -- -- -- 0.798 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.72 humidity 90.0 270 < th dose independent rect. 9 8
2 108.95 temperature 15.0 270 > th dose independent rect. 20 22
4 109.12 temperature 15.0 90 > th dose independent rect. 23 19
5 109.27 temperature 15.0 270 > th dose independent rect. 22 17
9 110.35 temperature 15.0 270 > th dose independent rect. 21 20
12 110.54 temperature 15.0 270 > th dose independent rect. 9 8
13 110.65 humidity 50.0 30 > th dose dependent rect. 18 18
14 110.69 humidity 50.0 270 > th dose dependent rect. 4 17
15 110.70 radiation 40.0 90 < th dose independent rect. 18 18
19 110.89 wind 1.0 14400 < th dose independent rect. 5 1
21 111.05 radiation 20.0 270 < th dose independent rect. 16 19
22 111.05 humidity 50.0 90 > th dose dependent rect. 6 17
23 111.07 radiation 40.0 270 < th dose independent rect. 3 9
24 111.14 radiation 20.0 270 < th dose independent rect. 17 17
36 111.53 temperature 15.0 270 > th dose independent rect. 10 17
41 111.60 radiation 40.0 270 < th dose dependent rect. 17 17
47 111.76 radiation 40.0 270 < th dose dependent rect. 16 19
71 112.48 wind 1.0 14400 > th dose independent rect. 5 1
72 112.48 radiation 30.0 270 < th dose independent rect. 4 18
75 112.57 humidity 50.0 270 > th dose dependent rect. 16 19
84 112.71 radiation 40.0 270 < th dose dependent rect. 4 18
85 112.72 radiation 40.0 270 < th dose dependent rect. 4 8
91 112.77 radiation 30.0 270 < th dose independent rect. 3 20
93 112.79 humidity 50.0 270 > th dose dependent rect. 4 8
101 112.91 radiation 40.0 270 < th dose dependent rect. 5 16
140 113.34 radiation 40.0 270 < th dose dependent rect. 3 20
148 113.48 humidity 70.0 270 > th dose independent rect. 3 19
159 113.56 humidity 70.0 270 > th dose independent rect. 4 17
189 113.87 humidity 50.0 90 > th dose dependent rect. 18 5
198 113.92 wind 7.0 90 < th dose independent rect. 23 19
207 113.99 temperature 15.0 270 > th dose independent rect. 21 7
211 114.02 humidity 90.0 270 < th dose dependent rect. 9 7
216 114.08 humidity 60.0 30 > th dose independent rect. 18 18
228 114.15 wind 1.0 14400 < th dose dependent rect. 5 1
242 114.23 atmosphere 1010.0 90 < th dose independent rect. 11 7
253 114.29 humidity 70.0 90 > th dose independent rect. 6 17
264 114.43 atmosphere 1015.0 30 < th dose independent rect. 18 18
266 114.45 atmosphere 995.0 270 > th dose independent rect. 15 8
268 114.47 temperature 15.0 90 > th dose independent rect. 23 7
275 114.52 temperature 15.0 90 > th dose independent rect. 11 7
284 114.56 wind 5.0 90 < th dose independent rect. 18 5
291 114.60 atmosphere 995.0 270 > th dose independent rect. 4 17
316 114.78 humidity 60.0 43200 < th dose dependent rect. 3 5
317 114.79 wind 1.0 30 > th dose independent rect. 12 6
321 114.80 atmosphere 995.0 270 > th dose independent rect. 17 16
347 114.87 temperature 15.0 10 > th dose independent rect. 23 7
358 114.91 humidity 50.0 270 > th dose independent rect. 4 17
368 114.96 wind 9.0 270 < th dose independent rect. 9 8
373 114.97 wind 7.0 270 < th dose independent rect. 23 16
399 115.10 wind 9.0 90 < th dose dependent rect. 18 5
400 115.10 humidity 50.0 270 > th dose dependent rect. 15 7
405 115.12 humidity 70.0 270 > th dose independent rect. 3 9
409 115.13 wind 5.0 270 < th dose independent rect. 18 2
418 115.15 humidity 50.0 90 > th dose dependent rect. 6 6
425 115.17 humidity 50.0 270 > th dose dependent rect. 18 2
428 115.18 humidity 50.0 270 > th dose independent rect. 17 16
429 115.18 atmosphere 995.0 30 > th dose independent rect. 18 18
435 115.19 precipitation 0.1 270 < th dose independent rect. 9 8
439 115.19 precipitation 0.1 270 < th dose dependent rect. 9 8
440 115.20 wind 9.0 30 < th dose independent rect. 12 6
448 115.22 temperature 10.0 30 > th dose independent rect. 18 18
463 115.30 precipitation 0.1 30 < th dose independent rect. 12 6
466 115.30 precipitation 0.1 30 < th dose dependent rect. 12 6
467 115.31 humidity 50.0 270 > th dose independent rect. 15 7
474 115.34 wind 7.0 270 < th dose independent rect. 17 16
475 115.34 humidity 50.0 90 > th dose independent rect. 6 17
481 115.36 temperature 15.0 4320 > th dose independent rect. 7 4
507 115.46 wind 1.0 14400 < th dose dependent rect. 1 5
535 115.55 radiation 10.0 90 < th dose dependent rect. 23 8
537 115.55 humidity 60.0 90 > th dose dependent rect. 9 14
551 115.58 humidity 90.0 270 < th dose dependent rect. 21 19
560 115.60 wind 1.0 270 > th dose independent rect. 9 8
564 115.62 atmosphere 1015.0 270 < th dose independent rect. 15 8
568 115.63 atmosphere 1015.0 90 < th dose independent rect. 18 5
577 115.68 temperature 10.0 43200 > th dose independent rect. 8 3
580 115.68 atmosphere 1015.0 270 < th dose independent rect. 9 8
582 115.68 temperature 10.0 270 > th dose independent rect. 17 16
586 115.70 precipitation 0.1 30 < th dose independent rect. 18 18
590 115.70 precipitation 0.1 30 < th dose dependent rect. 18 18
597 115.74 radiation 1.0 270 < th dose dependent rect. 21 10
605 115.77 wind 1.0 270 > th dose independent rect. 11 16
606 115.77 wind 9.0 30 < th dose independent rect. 18 18
608 115.78 temperature 30.0 270 < th dose independent rect. 17 16
610 115.79 radiation 10.0 90 < th dose independent rect. 23 7
612 115.80 precipitation 0.1 270 < th dose independent rect. 23 16
615 115.80 precipitation 0.1 270 < th dose dependent rect. 23 16
617 115.81 radiation 40.0 1440 < th dose dependent rect. 18 6
623 115.83 wind 9.0 270 < th dose dependent rect. 18 2
632 115.85 radiation 1.0 90 < th dose independent rect. 23 18
668 115.94 radiation 10.0 90 < th dose independent rect. 18 5
670 115.94 humidity 60.0 14400 < th dose dependent rect. 16 19
671 115.95 atmosphere 1015.0 270 < th dose independent rect. 16 6
672 115.95 atmosphere 1015.0 270 < th dose independent rect. 17 16
675 115.95 temperature 10.0 30 > th dose dependent rect. 12 6
678 115.96 atmosphere 995.0 90 > th dose independent rect. 18 5
684 115.98 radiation 10.0 90 < th dose dependent rect. 18 5
685 115.98 humidity 80.0 720 > th dose dependent rect. 8 7
697 116.00 temperature 10.0 90 > th dose independent rect. 18 5
698 116.00 humidity 50.0 90 > th dose independent rect. 18 5
704 116.01 radiation 40.0 1440 < th dose dependent rect. 18 8
709 116.03 radiation 1.0 270 < th dose independent rect. 21 9
728 116.07 temperature 10.0 1440 > th dose independent rect. 13 6
732 116.07 temperature 10.0 1440 > th dose independent rect. 19 18
735 116.07 atmosphere 995.0 1440 > th dose independent rect. 19 18
736 116.07 radiation 1.0 90 < th dose dependent rect. 23 18
756 116.14 radiation 30.0 270 < th dose independent rect. 15 8
768 116.17 precipitation 0.1 90 < th dose independent rect. 23 19
771 116.17 precipitation 0.1 90 < th dose dependent rect. 23 19
787 116.20 atmosphere 1015.0 270 < th dose independent rect. 5 16
828 116.30 precipitation 0.1 90 < th dose independent rect. 18 5
829 116.30 wind 7.0 270 < th dose independent rect. 16 6
834 116.30 precipitation 0.1 90 < th dose dependent rect. 18 5
845 116.33 temperature 10.0 270 > th dose independent rect. 15 8
855 116.35 temperature 15.0 1440 > th dose independent rect. 19 7
856 116.35 wind 9.0 270 < th dose independent rect. 15 8
857 116.35 precipitation 0.1 270 < th dose independent rect. 11 16
859 116.35 radiation 40.0 270 < th dose dependent rect. 15 7
860 116.35 precipitation 0.1 270 < th dose dependent rect. 11 16
871 116.38 temperature 30.0 90 < th dose independent rect. 18 5
882 116.40 atmosphere 1015.0 30 < th dose dependent rect. 12 6
883 116.41 temperature 30.0 270 < th dose independent rect. 15 7
889 116.43 humidity 50.0 10 > th dose independent rect. 6 6
902 116.46 precipitation 0.1 270 < th dose independent rect. 17 16
904 116.46 precipitation 0.1 270 < th dose dependent rect. 17 16
912 116.48 humidity 50.0 10 > th dose independent rect. 12 6
914 116.48 humidity 70.0 43200 < th dose independent rect. 23 8
917 116.48 humidity 60.0 14400 < th dose dependent rect. 17 17
921 116.49 humidity 60.0 14400 < th dose dependent sin 11 NA
924 116.50 wind 1.0 90 > th dose independent rect. 18 5
955 116.56 wind 1.0 14400 < th dose independent rect. 1 5
956 116.56 wind 1.0 270 > th dose independent rect. 23 16
959 116.57 wind 1.0 270 > th dose independent rect. 22 6
962 116.57 humidity 60.0 14400 < th dose independent rect. 16 19
965 116.58 atmosphere 995.0 10 > th dose independent rect. 6 17
966 116.58 humidity 50.0 14400 > th dose independent rect. 16 20
979 116.60 humidity 50.0 43200 < th dose dependent rect. 19 15
989 116.63 wind 7.0 90 < th dose independent rect. 23 7