BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0321300 Os03g0321300|AK071172
(384 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G30200.2 | chr1:10625147-10626286 FORWARD LENGTH=380 291 4e-79
AT5G46170.1 | chr5:18715638-18716825 REVERSE LENGTH=396 269 2e-72
AT4G18380.1 | chr4:10157957-10159099 FORWARD LENGTH=381 263 1e-70
AT1G78100.1 | chr1:29387907-29388911 FORWARD LENGTH=335 184 1e-46
AT1G22220.1 | chr1:7846694-7847638 FORWARD LENGTH=315 174 9e-44
>AT1G30200.2 | chr1:10625147-10626286 FORWARD LENGTH=380
Length = 379
Score = 291 bits (745), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/380 (43%), Positives = 224/380 (58%), Gaps = 27/380 (7%)
Query: 15 PREAEGEDHFDRVPDSLVLLIFNRLADARSLGRCSAVSKRFNSLVPLVDDACLRIDRVIT 74
P+ DHFD +PDSL+LLIF+++AD + LGRC VS+RF+SLVP V++ +R+D VI+
Sbjct: 17 PQSLTSFDHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVIS 76
Query: 75 XXXXX--------XXXXXXXXPRPAGRGVLSHLLKAMLLAVLKPFXXXXXXXXXXXXXXX 126
G S L + + + KPF
Sbjct: 77 DDDSSSSDENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQMLGQILGPKRSSSS 136
Query: 127 XXXXXXXXXXXXAQQHHSPAQVLKNFSSIRNLRMELPVSDVGTDDGVLLRWKAVFGSTLQ 186
HHSP QVLKNF IR L++ELP ++G +DG+LL+W+A FGSTL
Sbjct: 137 FDASFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLD 196
Query: 187 SCVILGGTRVDRXXXXXXXXXXXXXXGDSEASQGDDTGSIPESFYTNGGLKLRVVWTISS 246
+C+ILG + V + + E S +D G+IPESFYTNGGLKLRVVWTISS
Sbjct: 197 NCMILGASSVIQSNSVK----------NHENSVDEDNGNIPESFYTNGGLKLRVVWTISS 246
Query: 247 LIAAATRHYLLREIVKEHPTLERVALTDAHGQGTLSMGRDQIREFRDKPLAAAAAANRTQ 306
LIAA+ RHYLL+ I+ EH +L+R+ L+DA GQG L M R+Q+ E R PL+A++A+ RT
Sbjct: 247 LIAASARHYLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTL 306
Query: 307 VPACNMKLRYAPMLELSDGTRIQGATLVVIKPVXXXXXXXXXRKELDE--FVADAFDGPY 364
VPA NM+L YAP L+L DGT ++GATLV I+P +KE+ + +++DAF+ P+
Sbjct: 307 VPALNMRLWYAPELDLPDGTVLKGATLVAIRP-------SESKKEVCDASWLSDAFEEPF 359
Query: 365 REAVSALSKRRTYLLEMNGF 384
L KRRTY LEMN F
Sbjct: 360 GTVAKMLIKRRTYCLEMNSF 379
>AT5G46170.1 | chr5:18715638-18716825 REVERSE LENGTH=396
Length = 395
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/246 (56%), Positives = 168/246 (68%), Gaps = 10/246 (4%)
Query: 142 HHSPAQVLKNFSSIRNLRMELPVSDVGTDDGVLLRWKAVFGSTLQSCVILGGTRV-DRXX 200
HHSP QVLKNF IR LR+ELP ++G DDGVLL+W+A FGSTL +CVILG + V
Sbjct: 157 HHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDNCVILGASSVIPPNP 216
Query: 201 XXXXXXXXXXXXGDSEASQGDDTGSIPESFYTNGGLKLRVVWTISSLIAAATRHYLLREI 260
++ S DD GSIPESFYTNGGLKLRVVWTISSLIAA+ RHYLL+ I
Sbjct: 217 MRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPI 276
Query: 261 VKEHPTLERVALTDAHGQGTLSMGRDQIREFRDKPLAAAAAANRTQVPACNMKLRYAPML 320
+ EH TL+ + LTD+ GQG L M RDQ+ E R KPLAA++A+ RT VPA NM+L YAP L
Sbjct: 277 IAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASSASKRTLVPALNMRLWYAPTL 336
Query: 321 ELSDGTRIQGATLVVIKPVXXXXXXXXXRKELDE--FVADAFDGPYREAVSALSKRRTYL 378
EL DGT ++GATLV I+P +KE+ + +V+ AF+ PY A L KRRTY
Sbjct: 337 ELPDGTVLKGATLVAIRP-------SESKKEVSDISWVSSAFEEPYETAAKMLVKRRTYC 389
Query: 379 LEMNGF 384
LEMN F
Sbjct: 390 LEMNSF 395
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 43/52 (82%)
Query: 22 DHFDRVPDSLVLLIFNRLADARSLGRCSAVSKRFNSLVPLVDDACLRIDRVI 73
DHFD +PDS++LL+FN++ D ++LGRC VS+RF+SLVP VD+ +R+D VI
Sbjct: 25 DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVI 76
>AT4G18380.1 | chr4:10157957-10159099 FORWARD LENGTH=381
Length = 380
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 169/250 (67%), Gaps = 24/250 (9%)
Query: 142 HHSPAQVLKNFSSIRNLRMELPVSDVGTDDGVLLRWKAVFGSTLQSCVILGGTRVDRXXX 201
HHSP QVLKNF I+ L++ELP ++G DDGVLL+W+A FGSTL++CVILG + V
Sbjct: 148 HHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLENCVILGASSV----- 202
Query: 202 XXXXXXXXXXXGDSEASQG-----DDTGSIPESFYTNGGLKLRVVWTISSLIAAATRHYL 256
+EAS +D GSIPESFYTNGGLKLRVVWTISSLIAA+ RHYL
Sbjct: 203 -----IPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYL 257
Query: 257 LREIVKEHPTLERVALTDAHGQGTLSMGRDQIREFRDKPLAAAAAANRTQVPACNMKLRY 316
L+ I+ EH TL+ + LTD GQG L M RDQ+ E R KPL+A++A+ RT VPA NM+L Y
Sbjct: 258 LQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNMRLWY 317
Query: 317 APMLELSDGTRIQGATLVVIKPVXXXXXXXXXRKELDE--FVADAFDGPYREAVSALSKR 374
AP LEL DGT ++GATLV I+P +KE+ + +V+ AFD PY A L KR
Sbjct: 318 APSLELPDGTVLKGATLVAIRP-------SESKKEVCDVSWVSSAFDEPYGVAAKMLVKR 370
Query: 375 RTYLLEMNGF 384
RTY LEMN F
Sbjct: 371 RTYCLEMNSF 380
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 9 AEDLLLPR---EAEGEDHFDRVPDSLVLLIFNRLADARSLGRCSAVSKRFNSLVPLVDDA 65
+ D LL R E + DHFD +PDS++LLIFN + D ++LGRCS VSKRF+SL+P V++
Sbjct: 7 SSDPLLSRIHPEPQEIDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENV 66
Query: 66 CLRIDRVI 73
+R+D VI
Sbjct: 67 FVRVDCVI 74
>AT1G78100.1 | chr1:29387907-29388911 FORWARD LENGTH=335
Length = 334
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 178/368 (48%), Gaps = 40/368 (10%)
Query: 22 DHFDRVPDSLVLLIFNRLADARSLGRCSAVSKRFNSLVPLVDDACLRIDRVITXXXXXXX 81
D FD +PD +V+ I NR+ D ++L RC +VSKRFNSL + L++D+++
Sbjct: 2 DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61
Query: 82 XXXXXXPRPAGRGVLSHLLKAMLLAVLKPFXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQ 141
L K+ + +L P +
Sbjct: 62 IDSPIA------SFFRSLFKS-IHGLLPPIFSKPANSDEIL----------------TRS 98
Query: 142 HHSPAQVLKNFSSIRNLRMELPVSDVGTDDGVLLRWKAVFGSTLQSCVILGGTRVDRXXX 201
+PAQ+L F IRNL +EL DV + G ++WKA FG TL+SCVI+
Sbjct: 99 PKTPAQILSGFERIRNLEVELYGGDVKLEKGAAVKWKAEFGKTLKSCVIVA--------- 149
Query: 202 XXXXXXXXXXXGDSEASQGDDTGSIPESFYTNGGLKLRVVWTISSLIAAATRHYLLREIV 261
+EA+ D G + GLK RVVWTIS+L+AA+TRHYL+R++V
Sbjct: 150 --FRSATVNTSAATEAAAVVD-GVVESDSEFVCGLKTRVVWTISALMAASTRHYLMRDLV 206
Query: 262 KEHPTLERVALTDAHGQGTLSMGRDQIREFRDKPL-----AAAAAANRTQVPACNMKLRY 316
K+H +E++ + D+ G+GT+ M ++E+R+ + + RT VP+ M +R+
Sbjct: 207 KDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRH 266
Query: 317 APMLELSDGTRIQGATLVVIKPVXXXXXXXXXRKELDEFVADAFDGPYREAVSALSKRRT 376
AP L L G ++ ATLVV++P + F D D Y EAV+AL KRR
Sbjct: 267 APSLMLKSGICLEAATLVVVRPTGVASDDNDVELVTEAFAGDGDDCMYGEAVTALLKRRR 326
Query: 377 YLLEMNGF 384
+LEMN F
Sbjct: 327 NVLEMNSF 334
>AT1G22220.1 | chr1:7846694-7847638 FORWARD LENGTH=315
Length = 314
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 173/370 (46%), Gaps = 64/370 (17%)
Query: 22 DHFDRVPDSLVLLIFNRLADARSLGRCSAVSKRFNSLVPLVDDACLRIDRVITXXXXXXX 81
D FD +PD +++ I N++ D ++L RCS++SKRFNSLVP + LR+D ++
Sbjct: 2 DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDS----- 56
Query: 82 XXXXXXPRPAGRGVLSHLLKAMLLAVLKPFXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQ 141
P + L ++ + KP
Sbjct: 57 --------PVVTSIFRSLFNGLVSLLSKP---------------------AKPITITTLS 87
Query: 142 HHSPAQVLKNFSSIRNLRMELPVSDVGTDDGVLLRWKAVFGSTLQSCVILGGTRVDRXXX 201
P ++L F IRNL +ELP DV + G ++WKA FG TL+SCVI+
Sbjct: 88 PSLPFKILSRFDRIRNLDVELPGGDVKLEKGAAVKWKAEFGKTLKSCVIVA------FRS 141
Query: 202 XXXXXXXXXXXGDSEASQGDDTGSIPESFYTNGGLKLRVVWTISSLIAAATRHYLLREIV 261
G+S+A F T GLK RVVWTIS+L+AA++RHYL+RE+V
Sbjct: 142 AGTVSSPVAVEGESDAE-----------FVT--GLKTRVVWTISALMAASSRHYLMREVV 188
Query: 262 KEHPTLERVALTDAHGQGTLSMGRDQIREFRDKPLAA-----AAAANRTQVPACNMKLRY 316
KEH +E + + D +GT+ M + ++E R+ R+ VP+ M +R+
Sbjct: 189 KEHEEIESLVMRDKEREGTVVMNEEGLKELRNTEARVEDEERVVKNKRSVVPSVRMSMRH 248
Query: 317 APMLELSDGTRIQGATLVVIKPVXXXXXXXXXRKELDEFVADAF--DGPYREAVSALSKR 374
AP L+L G ++ ATLV+++P E +AF D Y EAV AL K
Sbjct: 249 APSLKLKSGICLESATLVIVRPSGADFEVGDDA----ELATEAFVGDCMYGEAVVALLKC 304
Query: 375 RTYLLEMNGF 384
+ LEMN F
Sbjct: 305 KKNALEMNSF 314
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,564,415
Number of extensions: 219958
Number of successful extensions: 438
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 427
Number of HSP's successfully gapped: 9
Length of query: 384
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 284
Effective length of database: 8,364,969
Effective search space: 2375651196
Effective search space used: 2375651196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)