Os03g0320100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha-L-arabinofuranosidase, C-terminal domain containing protein.
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Os03g0320100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha-L-arabinofuranosidase, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.02 | 0.418 | 9.19 | -1.6 | 1.11 | 0.905 | 0.625 | -0.498 | -0.543 | 6.55 | 50 | 4487 | -- | -- |
| 79.19 | 0.414 | 9.18 | -1.6 | 1.11 | 0.818 | 0.675 | -- | -0.557 | 6.53 | 49.18 | 4529 | -- | -- |
| 79.98 | 0.417 | 9.19 | -1.6 | 1.11 | 0.871 | -- | -0.549 | -0.54 | 6.53 | 50 | 4455 | -- | -- |
| 80.14 | 0.417 | 9.18 | -1.57 | 1.12 | 0.767 | -- | -- | -0.549 | 6.51 | 49 | 4496 | -- | -- |
| 144.77 | 0.56 | 9.22 | -1.6 | -- | 0.968 | -- | -0.86 | -0.516 | -- | 49.9 | 4451 | -- | -- |
| 86.06 | 0.435 | 9.19 | -1.34 | 1.12 | -- | 0.597 | -- | -0.612 | 6.46 | -- | -- | -- | -- |
| 86.95 | 0.437 | 9.19 | -1.33 | 1.12 | -- | -- | -- | -0.614 | 6.43 | -- | -- | -- | -- |
| 145.21 | 0.561 | 9.2 | -1.58 | -- | 0.708 | -- | -- | -0.526 | -- | 50 | 4447 | -- | -- |
| 96.56 | 0.458 | 9.12 | -- | 1.11 | 1.16 | -- | -- | -0.294 | 6.42 | 57.74 | 47520 | -- | -- |
| 152.13 | 0.576 | 9.21 | -1.3 | -- | -- | -- | -- | -0.591 | -- | -- | -- | -- | -- |
| 133.54 | 0.541 | 9.16 | -- | 1.1 | -- | -- | -- | -0.466 | 6.5 | -- | -- | -- | -- |
| 158.78 | 0.587 | 9.18 | -- | -- | 1.16 | -- | -- | -0.4 | -- | 58 | 31495 | -- | -- |
| 196.77 | 0.655 | 9.18 | -- | -- | -- | -- | -- | -0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 4 | 76.46 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 10 |
| 20 | 77.08 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 4 | 19 |
| 22 | 77.26 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 14 |
| 30 | 77.52 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 17 |
| 33 | 77.59 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 19 |
| 40 | 77.75 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 4 | 19 |
| 46 | 77.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 47 | 77.82 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 2 | 17 |
| 57 | 77.88 | temperature | 25 | 1440 | > th | dose independent | rect. | 24 | 5 |
| 65 | 77.93 | temperature | 25 | 270 | > th | dose independent | sin | 6 | NA |
| 76 | 78.07 | temperature | 25 | 270 | < th | dose independent | sin | 7 | NA |
| 82 | 78.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 85 | 78.17 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 101 | 78.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 110 | 78.42 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 111 | 78.43 | temperature | 25 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 122 | 78.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 133 | 78.60 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 138 | 78.62 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 141 | 78.63 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 24 | 23 |
| 154 | 78.69 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 176 | 78.75 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 214 | 78.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 221 | 78.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 233 | 78.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 11 |
| 244 | 78.93 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 254 | 78.95 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 24 | 23 |
| 277 | 79.01 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 16 | 7 |
| 302 | 79.07 | humidity | 50 | 30 | > th | dose independent | rect. | 23 | 17 |
| 363 | 79.18 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 407 | 79.27 | radiation | 10 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 423 | 79.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 432 | 79.33 | radiation | 10 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 441 | 79.35 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 8 |
| 457 | 79.38 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 461 | 79.38 | humidity | 50 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 462 | 79.38 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 469 | 79.39 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 477 | 79.40 | humidity | 50 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 501 | 79.43 | humidity | 50 | 4320 | < th | dose independent | rect. | 11 | 6 |
| 513 | 79.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 535 | 79.47 | humidity | 50 | 4320 | < th | dose independent | sin | 17 | NA |
| 579 | 79.50 | radiation | 10 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 582 | 79.51 | wind | 3 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 592 | 79.52 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 593 | 79.52 | humidity | 50 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 598 | 79.52 | humidity | 50 | 4320 | < th | dose independent | rect. | 13 | 22 |
| 602 | 79.52 | atmosphere | 1000 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 606 | 79.53 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 644 | 79.56 | humidity | 50 | 4320 | < th | dose dependent | sin | 11 | NA |
| 650 | 79.58 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 670 | 79.59 | humidity | 50 | 4320 | < th | dose independent | no | NA | NA |
| 815 | 79.60 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 828 | 79.62 | radiation | 10 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 883 | 79.67 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 892 | 79.67 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 911 | 79.69 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 949 | 79.72 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 13 | 10 |
| 994 | 79.75 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 1000 | 79.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 1 |