Os03g0297400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Malonyl CoA-acyl carrier protein transacylase family protein.
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Os03g0297400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Malonyl CoA-acyl carrier protein transacylase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.92 | 0.401 | 11.1 | -0.672 | 0.669 | 0.608 | -0.514 | 0.723 | -0.556 | 3.89 | 40.64 | 669 | -- | -- |
| 73.32 | 0.399 | 11.1 | -0.724 | 0.7 | 0.669 | -0.61 | -- | -0.58 | 3.78 | 41.19 | 617 | -- | -- |
| 73.36 | 0.399 | 11.1 | -0.648 | 0.668 | 0.596 | -- | 1.02 | -0.534 | 3.54 | 41.14 | 616 | -- | -- |
| 74.61 | 0.402 | 11.1 | -0.737 | 0.691 | 0.684 | -- | -- | -0.587 | 3.54 | 40.46 | 604 | -- | -- |
| 86.49 | 0.433 | 11 | -0.545 | -- | 0.286 | -- | 1.56 | -0.501 | -- | 46.1 | 996 | -- | -- |
| 84.85 | 0.432 | 11 | -0.651 | 0.394 | -- | -0.305 | -- | -0.468 | 2.06 | -- | -- | -- | -- |
| 85.03 | 0.432 | 11 | -0.641 | 0.393 | -- | -- | -- | -0.465 | 1.51 | -- | -- | -- | -- |
| 90.57 | 0.443 | 11.1 | -0.728 | -- | 0.276 | -- | -- | -0.529 | -- | 40.31 | 1098 | -- | -- |
| 88.3 | 0.438 | 11 | -- | 0.649 | 0.583 | -- | -- | -0.48 | 3.37 | 41.18 | 604 | -- | -- |
| 94.5 | 0.454 | 11 | -0.625 | -- | -- | -- | -- | -0.457 | -- | -- | -- | -- | -- |
| 95.86 | 0.458 | 11 | -- | 0.382 | -- | -- | -- | -0.394 | 1.45 | -- | -- | -- | -- |
| 101.23 | 0.469 | 11 | -- | -- | 0.313 | -- | -- | -0.476 | -- | 39.94 | 8372 | -- | -- |
| 104.81 | 0.478 | 11 | -- | -- | -- | -- | -- | -0.387 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.12 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 8 |
| 2 | 66.00 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 66.01 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 4 | 66.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 5 | 66.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 6 | 66.50 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 11 |
| 7 | 66.52 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 11 | 66.65 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 17 | 66.99 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 21 | 67.14 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 4 |
| 24 | 67.19 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 10 |
| 32 | 67.30 | temperature | 10.0 | 90 | > th | dose dependent | sin | 16 | NA |
| 40 | 67.46 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 7 |
| 55 | 67.73 | wind | 3.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 66 | 67.87 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 10 | 7 |
| 78 | 67.94 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 108 | 68.22 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 125 | 68.38 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 21 | 13 |
| 126 | 68.39 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 20 | 14 |
| 146 | 68.60 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 22 | 12 |
| 178 | 68.80 | temperature | 30.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 202 | 68.99 | wind | 7.0 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 213 | 69.06 | atmosphere | 1010.0 | 30 | < th | dose dependent | sin | 8 | NA |
| 220 | 69.09 | wind | 7.0 | 720 | > th | dose independent | rect. | 23 | 4 |
| 224 | 69.10 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 227 | 69.11 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 232 | 69.13 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 6 |
| 242 | 69.16 | temperature | 30.0 | 270 | < th | dose dependent | sin | 19 | NA |
| 249 | 69.19 | temperature | 25.0 | 90 | > th | dose independent | rect. | 12 | 11 |
| 365 | 69.62 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 402 | 69.76 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 486 | 69.95 | temperature | 10.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 576 | 70.15 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 11 | 3 |
| 578 | 70.15 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 12 |
| 588 | 70.18 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 6 |
| 601 | 70.21 | temperature | 25.0 | 10 | > th | dose independent | rect. | 13 | 10 |
| 641 | 70.32 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 669 | 70.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 730 | 70.56 | temperature | 25.0 | 720 | > th | dose dependent | sin | 1 | NA |
| 742 | 70.58 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 762 | 70.63 | wind | 5.0 | 720 | < th | dose independent | sin | 10 | NA |
| 785 | 70.68 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 5 | 16 |
| 793 | 70.70 | atmosphere | 1010.0 | 720 | < th | dose dependent | rect. | 20 | 6 |
| 800 | 70.71 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 823 | 70.76 | atmosphere | 1010.0 | 720 | < th | dose dependent | rect. | 21 | 4 |
| 833 | 70.77 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 887 | 70.87 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 975 | 71.03 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |