Os03g0295700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0295700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.45 | 0.368 | 9.66 | -1.06 | 1.36 | -0.447 | -0.715 | -0.638 | -0.0696 | 6.49 | 80 | 600 | -- | -- |
| 61.94 | 0.367 | 9.67 | -0.991 | 1.38 | -0.471 | -0.412 | -- | -0.0715 | 6.37 | 78 | 655 | -- | -- |
| 62.33 | 0.368 | 9.67 | -1.04 | 1.38 | -0.445 | -- | -0.255 | -0.0591 | 6.47 | 79 | 641 | -- | -- |
| 62.27 | 0.368 | 9.67 | -1.01 | 1.36 | -0.481 | -- | -- | -0.072 | 6.4 | 78 | 655 | -- | -- |
| 100.63 | 0.467 | 9.67 | -0.711 | -- | -1.57 | -- | 0.874 | 0.0747 | -- | 74 | 559 | -- | -- |
| 66.92 | 0.384 | 9.66 | -1.04 | 1.67 | -- | -0.354 | -- | -0.0758 | 6.58 | -- | -- | -- | -- |
| 67.24 | 0.384 | 9.66 | -1.04 | 1.67 | -- | -- | -- | -0.0747 | 6.59 | -- | -- | -- | -- |
| 98.67 | 0.463 | 9.67 | -0.901 | -- | -1.56 | -- | -- | 0.0281 | -- | 74.25 | 561 | -- | -- |
| 87.14 | 0.435 | 9.62 | -- | 1.34 | -0.64 | -- | -- | 0.0798 | 6.26 | 75.99 | 744 | -- | -- |
| 213.05 | 0.682 | 9.69 | -1 | -- | -- | -- | -- | -0.0407 | -- | -- | -- | -- | -- |
| 95.96 | 0.458 | 9.63 | -- | 1.66 | -- | -- | -- | 0.0415 | 6.62 | -- | -- | -- | -- |
| 119.96 | 0.51 | 9.65 | -- | -- | -1.6 | -- | -- | 0.129 | -- | 74.37 | 567 | -- | -- |
| 239.61 | 0.723 | 9.66 | -- | -- | -- | -- | -- | 0.0707 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.35 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 2 | 57.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 4 | 57.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 7 | 57.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 57.97 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 11 | 58.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 12 | 58.23 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 15 | 58.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 16 | 58.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 17 | 58.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 20 | 58.41 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 21 | 58.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 22 | 58.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 24 | 58.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 25 | 58.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 28 | 58.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 33 | 58.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 48 | 58.63 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 70 | 58.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 72 | 58.92 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 74 | 58.92 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 76 | 58.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 79 | 58.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 80 | 58.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 81 | 58.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 82 | 58.98 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 83 | 58.98 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 87 | 59.02 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 102 | 59.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 104 | 59.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 119 | 59.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 121 | 59.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 124 | 59.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 125 | 59.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 138 | 59.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 142 | 59.19 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 144 | 59.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 157 | 59.22 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 161 | 59.23 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 163 | 59.23 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 186 | 59.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 191 | 59.27 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 230 | 59.34 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 254 | 59.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 340 | 59.57 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 359 | 59.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 371 | 59.60 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 390 | 59.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 393 | 59.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 425 | 59.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 427 | 59.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 451 | 59.73 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 510 | 59.80 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 12 |
| 528 | 59.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 533 | 59.83 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 538 | 59.83 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 7 |
| 569 | 59.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 581 | 59.89 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 9 |
| 582 | 59.89 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 610 | 59.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 614 | 59.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 619 | 59.93 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 628 | 59.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 679 | 59.98 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 681 | 59.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 698 | 60.00 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 742 | 60.05 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 762 | 60.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 831 | 60.10 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 834 | 60.11 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 844 | 60.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 851 | 60.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 854 | 60.13 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 861 | 60.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 890 | 60.16 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 898 | 60.17 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 900 | 60.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 20 |
| 902 | 60.17 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 903 | 60.17 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 908 | 60.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 20 |
| 918 | 60.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 20 |
| 938 | 60.19 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 958 | 60.21 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 982 | 60.22 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 16 | 12 |
| 990 | 60.23 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 16 | 10 |
| 994 | 60.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |