BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0295700 Os03g0295700|AK067856
         (899 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58510.1  | chr5:23648287-23654421 REVERSE LENGTH=964         1011   0.0  
AT5G55060.1  | chr5:22342079-22346400 FORWARD LENGTH=663          141   2e-33

>AT5G58510.1 | chr5:23648287-23654421 REVERSE LENGTH=964
          Length = 963

 Score = 1011 bits (2614), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/946 (54%), Positives = 648/946 (68%), Gaps = 86/946 (9%)

Query: 38  LERFDDFTIASSWERFISEIEAICRQWLADGPNILTQKGAESVPSFDNLYVVKRELKHGK 97
           ++ FDDFT+ASSWERFIS+IEA CRQWLADGP  L +KGA +V    NL+ VK ELK+  
Sbjct: 20  VQHFDDFTLASSWERFISDIEATCRQWLADGPKNLVEKGAVAVEDSKNLFTVKHELKNVA 79

Query: 98  RVYCMEYHFMKSAKGKH----SYWDDDTHSMQLSFGVYEFLIIAPLSASGVVLDDPESTK 153
           + YCME++F     G        W+ ++H +QL FGV +FL+IAP SASGV+LD PES+K
Sbjct: 80  KSYCMEFYFQIDNNGSQQAGIGNWNSNSHDLQLCFGVKDFLLIAPQSASGVLLDTPESSK 139

Query: 154 LLSSVAIALSNCGSNWPAFVPVHDPSRKAYIGIQNLGTVFTRRFEADRIGSQVPIRLMHL 213
           LLS+VAIALSNCGS WPAFVPVHDPSRKAYIGIQN+GTVFTRRFEADR+GSQVP++LMHL
Sbjct: 140 LLSAVAIALSNCGSLWPAFVPVHDPSRKAYIGIQNMGTVFTRRFEADRVGSQVPVKLMHL 199

Query: 214 EGLHELFLSKFVLSSTDFPARV-KVIFSMKLTYRTPEYDYYNEETLVSEANESIAESEVA 272
           EGL+ELF+SKFV S  DF     +V F M+LTY+T  + Y  E+  +        +S+ A
Sbjct: 200 EGLYELFVSKFVYSGVDFSMHTFRVHFMMRLTYQT--FPYDEEDEEIDTDEVMGDKSDTA 257

Query: 273 NH------PKKQWDDDCSWAEWYSAEDPVKGFELTAIWGERVFEETLEMAEVENASSFDA 326
            H       K  WDDDC W+EWYSAEDP++GFEL   W +R  E TLEMAE+ENAS  DA
Sbjct: 258 EHYGSESRNKVLWDDDCPWSEWYSAEDPLRGFELVVTWADRTVESTLEMAELENASPHDA 317

Query: 327 DRWLLHPIVSPYMVDDSIGKFVGFASQLQLLVKAFESSAEAQFLEDFVAADTSGQENSKX 386
           ++W+LHPI+SPY+ D S GK + FASQL  LV+A +SS  AQF+EDFV+ +    EN K 
Sbjct: 318 EKWILHPILSPYLGDPSHGKRIDFASQLLCLVEALDSSFSAQFMEDFVSVENPSSENLKT 377

Query: 387 XXXXXXXXXXDRVMKDLFNDEVGNSNYVEAENKYGRAMKGAPSDSLFAQFCLHALWFGNC 446
                     DRV+KDLF +     ++ + E++  RA+K AP +SLF QFCLH+LWFGNC
Sbjct: 378 SVVIPPPSVLDRVIKDLFREGSKLPDFTKGEHRLSRALKAAPLESLFTQFCLHSLWFGNC 437

Query: 447 HIRAIAVLWIDFVREIRWCWEESERLPRMKSTSSIDLCTCLIHQKLHMLAICIERKKSLS 506
           +IRAIA LWI+FVRE+RWCWEE++ LP+M    SIDL +CLI+QKLH+LAICIE+K+ ++
Sbjct: 438 NIRAIAFLWIEFVREVRWCWEETQPLPKMPIDGSIDLSSCLINQKLHLLAICIEKKREMN 497

Query: 507 RE------------------------KGTDHAHEDGI----------------------- 519
            E                        K  + + E+ +                       
Sbjct: 498 EEFLDCIGSDDSSDASVSMEEHHKVDKRRNTSSEEELRRKRDSSIAEDTSKQLRFERKTE 557

Query: 520 -SNSVAQNKT---RKGSAGVVPSMMLLNTFQEMHAPYTQDALLMTEDMHEERLHAAEAFG 575
            +NSV Q+ T   R+GSAG V +MMLL + Q++HAP+TQD  LMTEDMHEERL A EAFG
Sbjct: 558 RTNSVNQSPTDAIRRGSAGPVGTMMLLKSRQQLHAPFTQDPPLMTEDMHEERLQAVEAFG 617

Query: 576 NAVGLSGQLERDVLSSDMSAFKAANPDAVFEDFIRWHSPGDWVS--EDGAEDSSG----- 628
           +++ + GQLE+D+L SDMSAFKAANPDAVFEDFIRWHSPGDW S      E S+G     
Sbjct: 618 DSLNVPGQLEKDILLSDMSAFKAANPDAVFEDFIRWHSPGDWESFEPKTTEPSAGPSTEG 677

Query: 629 ----WPPKGRLSQRMSEHGNMWRKIWNDAPALPVSEQKFLLDPIREGEKVIHYLETLRPQ 684
               WPP+GRLSQRMS+ GN+WRK WNDAPALP  +QK LLDP REGEK++HYLET+RP 
Sbjct: 678 SKDEWPPRGRLSQRMSDQGNLWRKSWNDAPALPADDQKPLLDPNREGEKIVHYLETVRPH 737

Query: 685 QLLEQMVCTVFKSSADILNRTTYGGFKLMKTKMDQLYATLASTLKSLQGKXX--XXXXXX 742
           QLLEQMVCT F+ SAD LN+T  G  + M +K++QLY  +  TL +LQ            
Sbjct: 738 QLLEQMVCTAFRGSADTLNQTNVGNMRQMTSKLEQLYLIMKFTLGALQRNNLPDKAKTVK 797

Query: 743 XXKRLCQVFEHIEKLLILATSVHRKLIDAPRLSQAIFADYFNYYLPKMGTSL---ESVCY 799
             KRLC VFE++EKL+ +A S+HRK +DA RL+Q IF+D++  Y P MG S    E+   
Sbjct: 798 DLKRLCMVFENVEKLVAVAASIHRKFLDASRLAQVIFSDFYGVYAPTMGMSANDEENKSR 857

Query: 800 EKEFTAKEKVGMHERDAVSNLFPPPTANQSWRKVLSMGNLLNGHEPIQREIVFSVIERIS 859
            +   ++++V + ER  VSNLF PP+ANQSWRKVLSMGNLLNGHEPI REI+FS  + ++
Sbjct: 858 TEMEVSRQEVSLRERQVVSNLFSPPSANQSWRKVLSMGNLLNGHEPILREIIFSTGDDVN 917

Query: 860 NG-HY-----SSPTPLSTDEQIETHRMYISGTSNDLWVALSVTSWD 899
           NG HY      + T     E+IETHRMY+SGTSNDL V LSVTS D
Sbjct: 918 NGIHYAAAADVAATSDRKGEEIETHRMYVSGTSNDLRVGLSVTSCD 963



>AT5G55060.1 | chr5:22342079-22346400 FORWARD LENGTH=663
          Length = 662

 Score =  141 bits (355), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 198/472 (41%), Gaps = 70/472 (14%)

Query: 348 VGFASQLQLLVKAFESSAEAQFLEDFVAADTS--------------------GQENSKXX 387
           +  AS ++ L  A E+   A+ ++DFVA+  S                    G++  K  
Sbjct: 134 IPLASVVKQLAVAIEAGKRAKNVKDFVASSGSSSPVRERGGLSLSAVKSLVLGEKEDKLG 193

Query: 388 XXXXXXXXXDRVMKDLFNDEVG------NSNYVEAENK--YGRAMKGAPSDSLFAQFCLH 439
                      ++  LFN + G       S+     N+  + + +  AP  S   +    
Sbjct: 194 FDSGDEDKLVSLINALFNVDSGFLSRKIVSDLESPTNRSSFAKDLHAAPPSSFVVKLAEV 253

Query: 440 ALWFGNCHIRAIAVLWIDFVREIRWCWEESERLPRMKSTSSIDLCTCLIHQKLHMLAICI 499
              F     R +A+ W   V E+R  W E + +P +   ++ DL +CL+HQ L ++  C+
Sbjct: 254 IGSF--TTPRRMALFWCRVVEELRRFWNEEKHIPWIPLDNNPDLKSCLLHQWLQVINCCL 311

Query: 500 ERKK----------SLSREKGTDHAHEDGISNSVAQNKTRKGSAG----------VVPSM 539
            RK           ++ R+  + +   D +S S+      K ++G           V ++
Sbjct: 312 ARKARNVAASEALDAVMRQASSANEKSD-VSESMGSLLYAKSNSGELILRLGVYNQVENL 370

Query: 540 MLLNTFQEMHAPYTQDALLMTEDMHEERLHAAEAFGNAVGLSGQLERDVLSSDMSAFKAA 599
            +L T + +++P TQ+  L+TED+  E        G+      QL      SDM AFKAA
Sbjct: 371 TMLETGEPVYSPITQEGPLLTEDLIRETEELVLRTGSMGAGCSQL-----LSDMQAFKAA 425

Query: 600 NPDAVFEDFIRWHSPGDWVSEDGAEDSSGWPPKGRLSQRMSEHGNMWRKIWNDAPALPVS 659
           NP  + EDF+RWHSP DW            P +G+LS RM + GN+WR++W  A  LP  
Sbjct: 426 NPGCILEDFVRWHSPPDWTENGNMSGDDSSPVRGQLSTRMQKEGNLWRELWETAKPLPAV 485

Query: 660 EQKFLLDPIREGEKVIHYLETLRPQQLLEQMVCTVFKSSADILNRTTYGGFKLMKTKM-- 717
           +Q  L D     E +++YLE +   +L EQ+  ++              GF +++  +  
Sbjct: 486 KQAPLFDEDLAVEGILNYLEDIPAAELFEQLFTSLVSL-----------GFVMVEPVLAT 534

Query: 718 -DQLYATLASTLKSLQGKXXXXXXXXXXKRLCQVFEHIEKLLILATSVHRKL 768
            D L          +               LCQV+E +E +L+    V R +
Sbjct: 535 NDDLSKLFFECKDYVVAICQGGAWTDKLDDLCQVYETVETMLLRPEEVLRSM 586



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.133    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,069,434
Number of extensions: 805734
Number of successful extensions: 1859
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1850
Number of HSP's successfully gapped: 3
Length of query: 899
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 792
Effective length of database: 8,173,057
Effective search space: 6473061144
Effective search space used: 6473061144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)