Os03g0291500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Asparagine synthase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0291500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Asparagine synthase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1176.52 | 1.61 | 6.07 | -3.53 | 2.77 | 3.44 | -4.89 | -8.03 | -0.975 | 4.8 | 6.95 | 5439 | 17 | 2.02 |
| 1225.85 | 1.63 | 6.1 | -3.51 | 2.73 | 4.91 | -4.93 | -- | -0.966 | 4.88 | 6.9 | 5441 | 17.1 | 2.25 |
| 1230.77 | 1.63 | 6.02 | -3.36 | 2.77 | 3.55 | -- | -8.79 | -0.894 | 4.99 | 7 | 5428 | 17.1 | 2.2 |
| 1274.67 | 1.66 | 6.23 | -3.07 | 2.76 | 5.47 | -- | -- | -1.03 | 5.09 | 6.8 | 5430 | 17 | 2.29 |
| 1621.55 | 1.88 | 6.06 | -3.36 | -- | 3.65 | -- | -8.85 | -0.815 | -- | 6.99 | 5406 | 17.1 | 2.23 |
| 1657.6 | 1.91 | 6.4 | -5.3 | 2.91 | -- | -5.96 | -- | -1.65 | 4.66 | -- | -- | -- | -- |
| 1748.7 | 1.96 | 6.38 | -5.27 | 2.9 | -- | -- | -- | -1.62 | 4.94 | -- | -- | -- | -- |
| 1673.96 | 1.91 | 6.24 | -2.96 | -- | 5.61 | -- | -- | -1.03 | -- | 6.802 | 5430 | 17 | 2.3 |
| 1478.68 | 1.79 | 6.23 | -- | 2.63 | 6.95 | -- | -- | -0.684 | 5.14 | 6.802 | 5430 | 17 | 2.33 |
| 2190.85 | 2.19 | 6.41 | -5.16 | -- | -- | -- | -- | -1.55 | -- | -- | -- | -- | -- |
| 2480.09 | 2.33 | 6.25 | -- | 2.8 | -- | -- | -- | -1.03 | 5 | -- | -- | -- | -- |
| 1849.86 | 2 | 6.19 | -- | -- | 7.18 | -- | -- | -0.537 | -- | 6.812 | 5428 | 17 | 2.33 |
| 2893.66 | 2.51 | 6.28 | -- | -- | -- | -- | -- | -0.974 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1235.22 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 3 | 1240.20 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 7 | 1253.34 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 8 | 1254.33 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 18 | 1260.47 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 67 | 1278.42 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 100 | 1286.90 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 15 | 9 |
| 105 | 1287.47 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 147 | 1293.12 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 154 | 1295.11 | wind | 7.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 157 | 1296.14 | wind | 7.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 171 | 1297.97 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 189 | 1301.20 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 271 | 1310.73 | wind | 5.0 | 4320 | > th | dose dependent | sin | 15 | NA |
| 278 | 1311.40 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 351 | 1320.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 386 | 1323.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 513 | 1334.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 527 | 1336.32 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 3 | 1 |
| 530 | 1336.60 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 543 | 1337.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 7 |
| 545 | 1337.81 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 568 | 1340.28 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 569 | 1340.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 591 | 1342.03 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 6 |
| 661 | 1346.77 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 668 | 1347.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 714 | 1351.00 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 727 | 1351.80 | wind | 7.0 | 4320 | < th | dose independent | rect. | 22 | 22 |
| 733 | 1352.05 | wind | 7.0 | 4320 | > th | dose independent | rect. | 22 | 22 |
| 745 | 1352.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 9 |
| 748 | 1352.84 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 806 | 1356.47 | wind | 7.0 | 4320 | > th | dose independent | rect. | 2 | 18 |
| 831 | 1357.91 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 832 | 1357.94 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 846 | 1358.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 847 | 1358.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 853 | 1358.83 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 896 | 1360.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 903 | 1360.62 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 920 | 1360.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 932 | 1361.02 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 971 | 1362.81 | wind | 7.0 | 4320 | > th | dose independent | rect. | 2 | 23 |
| 984 | 1363.13 | wind | 7.0 | 4320 | < th | dose independent | rect. | 2 | 23 |
| 996 | 1363.47 | wind | 7.0 | 4320 | > th | dose independent | no | NA | NA |