Os03g0287700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0287700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.12 | 0.759 | 5.34 | -2.07 | 0.271 | 2.14 | -1.69 | -0.535 | -0.615 | 7.15 | 19.7 | 1353 | -- | -- |
| 261.42 | 0.753 | 5.34 | -1.93 | 0.274 | 2.14 | -1.62 | -- | -0.586 | 6.99 | 19.46 | 1351 | -- | -- |
| 268.64 | 0.763 | 5.35 | -2.12 | 0.277 | 2.13 | -- | -0.574 | -0.619 | 6.88 | 19.62 | 1351 | -- | -- |
| 268.78 | 0.764 | 5.32 | -1.96 | 0.263 | 2.16 | -- | -- | -0.566 | 6.93 | 19.08 | 1351 | -- | -- |
| 272.39 | 0.769 | 5.35 | -2.1 | -- | 2.17 | -- | -0.502 | -0.603 | -- | 19.4 | 1351 | -- | -- |
| 394.53 | 0.931 | 5.21 | -1.16 | 0.376 | -- | -1.58 | -- | -0.0841 | 6.31 | -- | -- | -- | -- |
| 399.29 | 0.936 | 5.21 | -1.18 | 0.4 | -- | -- | -- | -0.0811 | 4.86 | -- | -- | -- | -- |
| 272.55 | 0.769 | 5.33 | -1.97 | -- | 2.18 | -- | -- | -0.573 | -- | 19.09 | 1351 | -- | -- |
| 355.65 | 0.878 | 5.24 | -- | 0.271 | 1.48 | -- | -- | -0.228 | 6.94 | 21.7 | 1308 | -- | -- |
| 407.76 | 0.944 | 5.22 | -1.17 | -- | -- | -- | -- | -0.0708 | -- | -- | -- | -- | -- |
| 436.18 | 0.977 | 5.18 | -- | 0.379 | -- | -- | -- | 0.0506 | 4.95 | -- | -- | -- | -- |
| 359.35 | 0.883 | 5.25 | -- | -- | 1.48 | -- | -- | -0.221 | -- | 21.8 | 1338 | -- | -- |
| 443.75 | 0.983 | 5.19 | -- | -- | -- | -- | -- | 0.0588 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 254.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 4 | 255.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 29 | 258.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 50 | 260.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 51 | 260.14 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 54 | 260.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 60 | 260.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 64 | 261.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 73 | 261.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 87 | 261.78 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 105 | 262.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 107 | 262.04 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 112 | 262.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 130 | 262.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 308 | 263.05 | temperature | 10 | 1440 | > th | dose dependent | sin | 2 | NA |
| 317 | 263.12 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 323 | 263.14 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 333 | 263.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 14 |
| 402 | 263.40 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 430 | 263.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 450 | 263.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 584 | 264.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 616 | 264.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 620 | 264.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 11 |
| 891 | 265.32 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 7 |
| 912 | 265.41 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 926 | 265.46 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 998 | 265.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 16 |