Os03g0283800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RabGAP/TBC domain containing protein.
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Os03g0283800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RabGAP/TBC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.47 | 0.452 | 6.78 | 0.49 | 0.667 | -0.884 | -0.234 | 0.831 | -0.104 | 9.98 | 91.04 | 5818 | -- | -- |
| 93 | 0.449 | 6.77 | 0.628 | 0.677 | -0.94 | -0.283 | -- | -0.0704 | 10.1 | 91.84 | 5792 | -- | -- |
| 92.42 | 0.448 | 6.78 | 0.452 | 0.659 | -0.905 | -- | 0.8 | -0.0934 | 10.1 | 91.97 | 5803 | -- | -- |
| 93.07 | 0.449 | 6.78 | 0.621 | 0.683 | -0.916 | -- | -- | -0.072 | 10.1 | 92.25 | 5793 | -- | -- |
| 119.46 | 0.509 | 6.79 | 0.426 | -- | -0.845 | -- | 0.921 | -0.0925 | -- | 91.61 | 5817 | -- | -- |
| 106.52 | 0.484 | 6.74 | 0.476 | 0.653 | -- | -0.238 | -- | 0.127 | 9.96 | -- | -- | -- | -- |
| 106.73 | 0.484 | 6.74 | 0.467 | 0.653 | -- | -- | -- | 0.127 | 10 | -- | -- | -- | -- |
| 120.38 | 0.511 | 6.8 | 0.581 | -- | -0.884 | -- | -- | -0.0895 | -- | 91.67 | 5814 | -- | -- |
| 94.48 | 0.453 | 6.78 | -- | 0.724 | -1.17 | -- | -- | -0.0581 | 10 | 92.76 | 15091 | -- | -- |
| 132.47 | 0.538 | 6.75 | 0.459 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 112.48 | 0.496 | 6.75 | -- | 0.652 | -- | -- | -- | 0.075 | 9.99 | -- | -- | -- | -- |
| 121.79 | 0.514 | 6.8 | -- | -- | -1.03 | -- | -- | -0.096 | -- | 92.69 | 15962 | -- | -- |
| 138.03 | 0.548 | 6.77 | -- | -- | -- | -- | -- | 0.0755 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.69 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 2 | 86.88 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 3 |
| 3 | 87.02 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 6 | 87.29 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 6 |
| 11 | 87.54 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 7 |
| 12 | 87.63 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 29 | 88.07 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 32 | 88.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 50 | 88.25 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 55 | 88.30 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 10 |
| 58 | 88.34 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 59 | 88.35 | temperature | 20.0 | 720 | > th | dose independent | sin | 9 | NA |
| 74 | 88.47 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 79 | 88.51 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 138 | 88.76 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 180 | 89.06 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 202 | 89.23 | temperature | 20.0 | 720 | < th | dose independent | sin | 8 | NA |
| 237 | 89.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 5 |
| 240 | 89.50 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 249 | 89.55 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 257 | 89.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 263 | 89.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 285 | 89.76 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 11 | 18 |
| 297 | 89.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 332 | 90.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 341 | 90.04 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 357 | 90.15 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 382 | 90.24 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 418 | 90.44 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 20 |
| 443 | 90.56 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 13 |
| 461 | 90.66 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 462 | 90.66 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 18 |
| 501 | 90.77 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 511 | 90.80 | temperature | 10.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 526 | 90.86 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 537 | 90.89 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 20 |
| 542 | 90.92 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 546 | 90.93 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 578 | 91.02 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 580 | 91.02 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 16 |
| 593 | 91.08 | wind | 5.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 595 | 91.08 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 635 | 91.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 636 | 91.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 653 | 91.24 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 661 | 91.26 | temperature | 30.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 667 | 91.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 670 | 91.28 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 686 | 91.31 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 695 | 91.34 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 725 | 91.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 758 | 91.50 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 767 | 91.53 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 6 |
| 769 | 91.53 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 18 |
| 772 | 91.54 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 775 | 91.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 776 | 91.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 778 | 91.55 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 779 | 91.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 781 | 91.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 782 | 91.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 787 | 91.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 788 | 91.55 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 810 | 91.61 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 845 | 91.70 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 853 | 91.71 | humidity | 90.0 | 4320 | > th | dose dependent | sin | 0 | NA |
| 855 | 91.72 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 19 |
| 872 | 91.76 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 14 | 18 |
| 873 | 91.76 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 879 | 91.77 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 886 | 91.78 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 895 | 91.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 901 | 91.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 907 | 91.81 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 908 | 91.81 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 913 | 91.82 | radiation | 10.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 925 | 91.84 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 939 | 91.88 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 941 | 91.88 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 942 | 91.89 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 956 | 91.90 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 972 | 91.92 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 983 | 91.94 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 989 | 91.95 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 16 |
| 992 | 91.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 995 | 91.96 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 997 | 91.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 17 |