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Os03g0270700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.32 (0.0223) R2 : 0.718
β1 : 1.18 (0.0817) R2dD : 0.135 R2D : 0.133
β2 : 1.66 (0.0541) R2dC : 0.586 R2C : 0.587
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0709 (0.0476) R2dN8 : 0.00183 R2N8 : -0.00707
σ : 0.42
deviance : 80.28
__
_____
C
peak time of C : 22
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
63.23 0.374 9.16 2.25 1.65 -0.0233 -0.918 4.05 0.373 21.9 19.25 4166 -- --
76.98 0.412 9.31 1.2 1.63 -0.214 -0.901 -- 0.107 21.8 19.25 4166 -- --
66.05 0.379 9.16 2.28 1.66 -0.0273 -- 4 0.375 22 18.9 4334 -- --
74.86 0.403 9.35 0.676 1.62 0.504 -- -- -0.0612 22 32.28 47520 -- --
222.81 0.699 9.2 1.75 -- -1.01 -- 2.14 0.323 -- 18.9 4334 -- --
77.64 0.413 9.32 1.15 1.66 -- -0.837 -- 0.0702 21.9 -- -- -- --
80.28 0.42 9.32 1.18 1.66 -- -- -- 0.0709 22 -- -- -- --
227.82 0.706 9.24 1.39 -- -0.916 -- -- 0.219 -- 18.9 4334 -- --
81.19 0.42 9.39 -- 1.65 0.828 -- -- -0.216 22 32.85 47520 -- --
246.24 0.733 9.28 1.21 -- -- -- -- 0.0722 -- -- -- -- --
117.26 0.507 9.35 -- 1.66 -- -- -- -0.0611 22.1 -- -- -- --
241.75 0.724 9.35 -- -- 1.56 -- -- -0.257 -- 10.94 773 -- --
284.55 0.787 9.31 -- -- -- -- -- -0.0615 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.75 radiation 30.0 270 < th dose independent rect. 18 16
2 55.38 radiation 30.0 270 < th dose independent rect. 17 18
7 55.71 temperature 20.0 270 > th dose independent rect. 5 6
11 56.02 radiation 40.0 270 < th dose independent rect. 5 7
15 56.28 temperature 10.0 270 > th dose dependent rect. 3 8
17 56.34 temperature 10.0 270 > th dose dependent rect. 5 6
19 56.81 radiation 1.0 270 < th dose dependent sin 8 NA
20 56.83 radiation 40.0 270 < th dose dependent rect. 18 16
27 57.45 radiation 40.0 270 < th dose independent rect. 6 17
35 57.66 radiation 1.0 270 < th dose dependent rect. 22 11
41 57.72 radiation 1.0 270 < th dose dependent rect. 22 8
46 57.77 temperature 20.0 270 > th dose independent rect. 6 16
54 57.88 wind 7.0 270 < th dose independent rect. 22 8
58 57.92 temperature 10.0 270 > th dose independent rect. 22 8
59 57.92 temperature 30.0 270 < th dose independent rect. 22 8
60 57.92 humidity 50.0 270 > th dose independent rect. 22 8
63 57.92 atmosphere 995.0 270 > th dose independent rect. 22 8
64 57.92 radiation 20.0 270 < th dose independent rect. 22 8
67 57.92 temperature 10.0 270 > th dose independent rect. 6 16
70 57.96 radiation 40.0 270 < th dose dependent rect. 22 8
73 57.98 temperature 10.0 270 > th dose dependent rect. 22 8
82 58.06 temperature 10.0 270 > th dose dependent rect. 23 6
84 58.08 temperature 20.0 720 < th dose independent rect. 5 3
88 58.12 radiation 1.0 270 < th dose independent sin 9 NA
99 58.13 precipitation 0.1 270 < th dose independent rect. 6 16
106 58.13 precipitation 0.1 270 < th dose dependent rect. 6 16
107 58.14 radiation 1.0 270 < th dose independent rect. 22 7
112 58.17 humidity 60.0 270 > th dose independent rect. 3 9
115 58.19 wind 9.0 270 < th dose independent rect. 6 16
121 58.22 precipitation 0.1 270 < th dose independent rect. 22 8
122 58.22 precipitation 0.1 270 < th dose dependent rect. 22 8
124 58.25 precipitation 0.1 270 < th dose independent rect. 5 6
125 58.25 precipitation 0.1 270 < th dose dependent rect. 5 6
136 58.33 temperature 10.0 270 > th dose independent rect. 5 6
138 58.33 atmosphere 995.0 270 > th dose independent rect. 5 6
139 58.33 atmosphere 1015.0 270 < th dose independent rect. 5 6
140 58.33 temperature 10.0 270 > th dose independent rect. 11 18
141 58.34 wind 9.0 270 < th dose independent rect. 5 6
143 58.36 humidity 50.0 270 > th dose independent rect. 5 6
144 58.36 precipitation 0.1 270 < th dose independent rect. 4 8
148 58.36 precipitation 0.1 270 < th dose dependent rect. 4 8
169 58.38 wind 9.0 270 < th dose independent rect. 11 18
176 58.41 atmosphere 995.0 270 > th dose independent rect. 5 17
177 58.42 temperature 20.0 720 < th dose independent rect. 4 5
180 58.42 radiation 40.0 270 < th dose dependent rect. 5 6
181 58.46 radiation 20.0 270 < th dose independent rect. 6 3
186 58.49 radiation 1.0 270 < th dose independent rect. 22 11
188 58.49 temperature 30.0 720 < th dose dependent rect. 3 6
189 58.50 temperature 10.0 270 > th dose independent rect. 4 8
190 58.50 atmosphere 995.0 270 > th dose independent rect. 4 8
191 58.50 atmosphere 1015.0 270 < th dose independent rect. 4 8
192 58.50 temperature 10.0 270 > th dose independent rect. 12 16
194 58.52 wind 9.0 270 < th dose independent rect. 4 8
196 58.53 wind 9.0 270 < th dose independent rect. 12 16
198 58.53 wind 9.0 270 < th dose dependent rect. 22 7
217 58.63 atmosphere 1015.0 270 < th dose independent rect. 6 16
223 58.68 wind 1.0 270 > th dose independent rect. 5 17
233 58.73 temperature 20.0 10 > th dose independent rect. 6 8
236 58.75 temperature 25.0 720 < th dose dependent rect. 5 2
250 58.81 atmosphere 1015.0 270 < th dose independent rect. 23 6
309 59.16 atmosphere 1015.0 270 < th dose independent rect. 22 8
335 59.24 wind 1.0 90 > th dose independent rect. 6 7
350 59.30 humidity 50.0 270 > th dose dependent rect. 22 7
354 59.34 precipitation 0.1 270 < th dose independent rect. 11 18
355 59.34 precipitation 0.1 270 < th dose dependent rect. 11 18
356 59.35 radiation 40.0 270 < th dose dependent rect. 6 4
364 59.41 precipitation 0.1 270 < th dose independent rect. 12 16
367 59.41 precipitation 0.1 270 < th dose dependent rect. 12 16
387 59.51 radiation 40.0 90 < th dose independent rect. 13 17
394 59.57 radiation 1.0 270 > th dose independent sin 8 NA
400 59.58 wind 1.0 10 > th dose independent rect. 6 8
428 59.73 radiation 40.0 270 < th dose dependent rect. 5 19
470 59.87 temperature 30.0 270 < th dose independent rect. 5 6
499 59.95 radiation 40.0 270 < th dose dependent rect. 6 17
510 60.01 radiation 1.0 270 > th dose independent rect. 18 17
514 60.03 humidity 60.0 270 > th dose independent rect. 18 17
522 60.08 temperature 10.0 270 > th dose dependent rect. 1 2
524 60.08 radiation 40.0 30 < th dose dependent rect. 7 19
526 60.09 radiation 1.0 90 > th dose independent rect. 6 7
532 60.10 atmosphere 1010.0 10 < th dose independent rect. 2 5
535 60.10 temperature 10.0 10 > th dose dependent rect. 6 7
560 60.17 atmosphere 1010.0 10 < th dose independent rect. 24 7
571 60.23 temperature 30.0 720 < th dose dependent sin 5 NA
580 60.27 radiation 1.0 270 > th dose independent rect. 4 7
604 60.32 temperature 10.0 10 > th dose independent rect. 6 8
606 60.32 atmosphere 995.0 10 > th dose independent rect. 6 8
607 60.32 atmosphere 1015.0 10 < th dose independent rect. 6 8
609 60.32 precipitation 0.1 10 < th dose independent rect. 6 8
610 60.32 temperature 10.0 10 > th dose independent rect. 14 16
613 60.32 precipitation 0.1 10 < th dose dependent rect. 6 8
660 60.47 wind 9.0 10 < th dose independent rect. 14 16
668 60.50 humidity 50.0 270 > th dose independent rect. 12 17
684 60.51 wind 9.0 270 < th dose dependent rect. 1 2
692 60.52 wind 9.0 10 < th dose independent rect. 6 8
699 60.54 temperature 10.0 720 > th dose dependent sin 9 NA
717 60.61 wind 5.0 270 < th dose independent rect. 1 2
732 60.66 temperature 10.0 270 > th dose independent rect. 1 2
734 60.66 temperature 30.0 270 < th dose independent rect. 1 2
735 60.66 humidity 50.0 270 > th dose independent rect. 1 2
738 60.66 atmosphere 995.0 270 > th dose independent rect. 1 2
739 60.66 atmosphere 1010.0 270 < th dose independent rect. 1 2
741 60.66 radiation 1.0 270 < th dose independent rect. 1 2
747 60.66 temperature 10.0 270 > th dose independent rect. 3 22
748 60.66 radiation 1.0 270 < th dose dependent rect. 1 2
757 60.67 wind 9.0 90 < th dose dependent rect. 13 17
759 60.68 precipitation 0.1 270 < th dose independent rect. 1 2
763 60.68 precipitation 0.1 270 < th dose dependent rect. 1 2
807 60.75 radiation 40.0 10 < th dose independent rect. 14 16
818 60.77 temperature 10.0 720 > th dose dependent rect. 19 15
841 60.80 temperature 30.0 720 < th dose dependent rect. 1 13
847 60.82 wind 1.0 270 > th dose independent rect. 23 6
860 60.85 wind 9.0 270 < th dose independent rect. 3 22
868 60.87 temperature 10.0 270 > th dose independent rect. 10 8
869 60.87 atmosphere 1015.0 270 < th dose independent rect. 10 8
870 60.87 wind 9.0 270 < th dose independent rect. 18 16
871 60.87 temperature 10.0 270 > th dose independent rect. 18 16
872 60.87 atmosphere 995.0 270 > th dose independent rect. 18 16
873 60.87 precipitation 0.1 270 < th dose independent rect. 18 16
877 60.87 precipitation 0.1 270 < th dose dependent rect. 18 16
888 60.89 atmosphere 995.0 270 > th dose dependent rect. 23 6
909 60.93 radiation 10.0 30 < th dose independent rect. 24 7
940 60.97 atmosphere 995.0 10 > th dose independent rect. 6 20
969 61.01 humidity 50.0 270 > th dose dependent rect. 1 2
976 61.02 wind 9.0 270 < th dose independent rect. 10 8
983 61.03 precipitation 0.1 270 < th dose independent rect. 10 8
987 61.03 precipitation 0.1 270 < th dose dependent rect. 10 8
992 61.04 temperature 30.0 720 < th dose dependent rect. 23 15