Os03g0267600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0267600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.28 | 0.33 | 10.2 | 0.549 | 1.26 | 0.727 | 0.728 | -1.13 | 0.0975 | 6.32 | 10.01 | 1374 | -- | -- |
| 51.16 | 0.333 | 10.2 | 0.718 | 1.25 | 0.693 | 0.777 | -- | 0.168 | 6.43 | 10.01 | 1356 | -- | -- |
| 50.58 | 0.331 | 10.2 | 0.554 | 1.27 | 0.729 | -- | -1.15 | 0.0934 | 6.31 | 10.01 | 1372 | -- | -- |
| 52.64 | 0.338 | 10.2 | 0.742 | 1.25 | 0.687 | -- | -- | 0.176 | 6.37 | 10 | 1358 | -- | -- |
| 132.69 | 0.537 | 10.2 | 0.618 | -- | 0.683 | -- | -1.04 | 0.145 | -- | 10 | 1425 | -- | -- |
| 64.78 | 0.377 | 10.2 | 0.942 | 1.26 | -- | 0.755 | -- | 0.368 | 6.06 | -- | -- | -- | -- |
| 66.18 | 0.381 | 10.2 | 0.949 | 1.26 | -- | -- | -- | 0.365 | 6.04 | -- | -- | -- | -- |
| 133.88 | 0.539 | 10.2 | 0.756 | -- | 0.726 | -- | -- | 0.154 | -- | 10.18 | 1428 | -- | -- |
| 66.93 | 0.381 | 10.2 | -- | 1.19 | 0.773 | -- | -- | 0.116 | 6.44 | 10.01 | 1380 | -- | -- |
| 148.54 | 0.57 | 10.2 | 0.986 | -- | -- | -- | -- | 0.393 | -- | -- | -- | -- | -- |
| 89.92 | 0.444 | 10.2 | -- | 1.27 | -- | -- | -- | 0.259 | 6 | -- | -- | -- | -- |
| 148.44 | 0.567 | 10.3 | -- | -- | 0.865 | -- | -- | 0.143 | -- | 10.01 | 1429 | -- | -- |
| 174.17 | 0.616 | 10.2 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.44 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 2 | 49.53 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 3 | 49.54 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 6 | 49.62 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 10 | 49.65 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 6 |
| 14 | 49.70 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 16 | 49.71 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 19 | 49.72 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 25 | 49.74 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 28 | 49.78 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 32 | 49.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 33 | 49.88 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 39 | 49.91 | radiation | 10 | 1440 | > th | dose independent | sin | 22 | NA |
| 45 | 49.94 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 49 | 49.94 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 59 | 49.96 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 13 |
| 94 | 50.02 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 106 | 50.02 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 144 | 50.11 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 258 | 50.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 345 | 50.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 364 | 50.54 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 433 | 50.66 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 478 | 50.78 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 494 | 50.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 498 | 50.83 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 501 | 50.84 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 503 | 50.84 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 505 | 50.85 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 513 | 50.86 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 543 | 50.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 558 | 50.93 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 624 | 51.03 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 670 | 51.15 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 698 | 51.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 722 | 51.28 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 753 | 51.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 756 | 51.34 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 10 |
| 769 | 51.36 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 795 | 51.41 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 821 | 51.43 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 844 | 51.46 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 935 | 51.54 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 940 | 51.54 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 4 |