BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0267600 Os03g0267600|AK072790
(899 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29510.1 | chr2:12635231-12637838 FORWARD LENGTH=840 182 6e-46
AT5G59020.1 | chr5:23827160-23829603 REVERSE LENGTH=781 156 5e-38
AT5G01030.1 | chr5:10638-13003 FORWARD LENGTH=745 144 3e-34
AT2G37930.1 | chr2:15873284-15874770 FORWARD LENGTH=468 108 1e-23
AT1G04490.1 | chr1:1218020-1219325 REVERSE LENGTH=402 89 9e-18
AT2G33360.1 | chr2:14140901-14142870 FORWARD LENGTH=604 88 2e-17
AT1G63520.1 | chr1:23560205-23561873 FORWARD LENGTH=529 83 7e-16
AT4G11450.1 | chr4:6959065-6961223 REVERSE LENGTH=695 64 4e-10
>AT2G29510.1 | chr2:12635231-12637838 FORWARD LENGTH=840
Length = 839
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 202/464 (43%), Gaps = 106/464 (22%)
Query: 453 SSGNKGSRRSPLRRMLDPILKPRQSSTSGPIQPSFVPKCHLPGHIDKQSLSLGGSALQNV 512
S+ N+G R SPLRR+LDP++KP+ S + +PS K++ S S+ +
Sbjct: 465 SAANRG-RSSPLRRLLDPLIKPKSSHSCRSPEPSL-----------KEAPSSQPSSSSFL 512
Query: 513 QRRSVDSVVNSNCRTETNTNQPPQVLNSERYLQQDIDSTTTRHALLQLAWKNGLPFFMLS 572
R S V AL ++ KN P F +
Sbjct: 513 SRNGKSSTV---------------------------------QALFRVTSKNDQPLFTFA 539
Query: 573 CGSD--ILVATVRRKGISDNNDLESTYTLFGVEEPKKRGGAWIKAGNKNKKDQLVYNIVG 630
+ I AT+R++ + + D YT F V+E +K+ W+ K + + NIV
Sbjct: 540 VEKEQSITAATIRKQTLPEKEDYGHKYTFFTVQEVQKKNAKWMNNSRKVQSQEYTSNIVA 599
Query: 631 EMRVSHRKSRCYQAEK---NHLHREFVLVGSEQLPSSEESGDSHVSREFAAFISAVSQQE 687
+MRVS K E+ N L REFVLV SE S + E AA + + +
Sbjct: 600 QMRVSDPKPLFLAGERSAENLLTREFVLVASE----------SQRTNELAAMVIKIPKLT 649
Query: 688 PETXXXXXXXXXXXXXXTPTDCSCPLGNFHPNTRDDSCASSSVLAVLPNGFHGTSTSGQP 747
T T D A + VLP+G H G P
Sbjct: 650 DTTSS--------------------------TTLGDYFAEVNATVVLPSGVHSLPHKGGP 683
Query: 748 LPLIERWKSGGACDCGGWDEGCMLSVLSDDARENKGDKSTQANQTTDGSQRFDLFVQGRS 807
LI+RWKS G+CDCGGWD GC L +L+ N+ +K + TT S F LF QG
Sbjct: 684 SSLIQRWKSDGSCDCGGWDTGCNLRILT-----NQHNKPINPSPTT--SDAFKLFFQGGV 736
Query: 808 REDKHA--FSMVSFREGLYTVEFRSSIALLQAFAMCIVMLHGRRP----------TRTQA 855
+E+ + S ++REG+Y VE+ +S++LLQAF++CI + GR P +R +
Sbjct: 737 QENNNQPYLSFTTYREGVYAVEYNTSLSLLQAFSICIAVNEGRNPLIKTTVEPNTSRVEK 796
Query: 856 GVHASQEHASLADHKLNKIMAASQGRAQASYVPHRPPLSPVGRA 899
+ E +S+ + L + A A Y+ H PPLSPVGR
Sbjct: 797 KAYGG-EMSSIQNENLKSFSGPIEAEAPARYLSHHPPLSPVGRV 839
>AT5G59020.1 | chr5:23827160-23829603 REVERSE LENGTH=781
Length = 780
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 208/463 (44%), Gaps = 69/463 (14%)
Query: 445 VDKINGDKSSGNKGSRRSPLRRMLDPILKPRQSSTSGPIQPSFVPKCHLPGHIDKQSLSL 504
VD N +K S + S LRR+L+P+LKPR +++ ++ P Q L L
Sbjct: 379 VDGSNCNKPSKKDTTTTSHLRRLLEPLLKPRAANSGNSVEG--------PKGQGLQRLKL 430
Query: 505 GGSALQNVQRRSVDSVVNSNCRTETNTNQPPQVLNSERYLQQDIDSTTTRHALLQLAWKN 564
G + ++V N N + + S+ R A+L++ KN
Sbjct: 431 GITGCKSV-----------------NVNDSAH--------GKKLGSSMVR-AVLRVTVKN 464
Query: 565 GLPFFMLSCG--SDILVATVRRKGISDNNDLESTYTLFGVEEPKKRGGAWIKAGNKNKKD 622
P F + +DI+ AT ++ G S+ + S YT F +++ K+ G W+ +
Sbjct: 465 NQPLFTFAVNKETDIIAATQKKMGSSEEGECTSVYTFFSIKDHKRNSG-WLNQRGSGQTH 523
Query: 623 QLVYNIVGEMRVSHRKSRCYQAEKNHLHREFVLVGSEQLPSSEESGDSHVSREFAAFISA 682
L+ N+V +MRVS + + REFVL E S E D + E AA I
Sbjct: 524 GLISNVVAQMRVS-------SSLPSGSIREFVLFSVELDRESTEKSDLQLKNELAAIIVK 576
Query: 683 VSQQEPETXXXXXXXXXXXXXXTPTDCSCPLGNFHPNTRD---DSCASSSVLAVLPNGFH 739
+ + T D + G + +D D S++V +L +G H
Sbjct: 577 MPR----------LFHRRAPLNTVQDHNATSGELEDHIKDKFFDQDISATV--ILQSGVH 624
Query: 740 GTSTSGQPLPLIERWKSGGACDCGGWDEGCMLSVLSDDARENKGDKSTQANQTTDGSQRF 799
G P LI+RW++GG+CDCGGWD GC L +L++ + N K + + + S RF
Sbjct: 625 SMPQKGGPSSLIQRWRTGGSCDCGGWDMGCNLRILTN--QHNLSYKKSATSNSPPSSNRF 682
Query: 800 DLFVQGRSREDKHAFSMVSFREGLYTVEFRSSIALLQAFAMCIVMLHGRRPTRTQAGVHA 859
+LF G E+ S +EG+Y+V + SS++ LQAF++C+ + R+ + +
Sbjct: 683 ELFFLGEQAEEHPFLSFKPIKEGIYSVAYNSSLSQLQAFSICMALAESRKMSE-----NI 737
Query: 860 SQEHASLADHKL---NKIMAASQGRAQASYVPHRPPLSPVGRA 899
++ +S +HK+ ++ + V ++P SPVGR
Sbjct: 738 LEQKSSCDEHKVRGKTVLLPDQDSNPNGNTVGYQPRFSPVGRV 780
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 84 PGRKATTVDELVKHMSNVPSYLQRKETSGHLQDKALNVGVLEWGLLARWSH 134
P ++ ELVK+MS +P +L+R ET+ Q+K L+VGVL+WG L +W H
Sbjct: 4 PVKQRLESHELVKYMSKLPVFLERAETTP--QEKLLSVGVLDWGRLEKWQH 52
>AT5G01030.1 | chr5:10638-13003 FORWARD LENGTH=745
Length = 744
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 237/578 (41%), Gaps = 158/578 (27%)
Query: 348 RIPYSCPLPI------MDSSEELGTSRTGTQGDSVGAAVT-------IGENRNQKQISRG 394
+IP SCPL D LGT +G +G + T E+ ++K+
Sbjct: 299 QIPSSCPLSFDLERDSEDMMLPLGTDLSGKRGGKRHSKTTSRIFDREFPEDESRKERHPS 358
Query: 395 ASERTP----RISAKFSDMDASPHRHLVSGLNRVNRCSSLKDGP-CPRQPEASTSVDKIN 449
S+R R+S FS D S + L S + + S DG CP Q N
Sbjct: 359 PSKRFSFSFGRLSRNFSLKDISAGQPLSSSEDTIMSGSMRFDGSVCPSQSS--------N 410
Query: 450 GDKSSGNKGSRRSPLRRMLDPILKPRQSSTSGPIQPSFVPKCHLPGHIDKQSLSLGGSAL 509
+ + + SR SPLRR LDP+LKP+ S S L
Sbjct: 411 PENQNTHCRSRVSPLRRFLDPLLKPKASE----------------------------SVL 442
Query: 510 QNVQRRSVDSVVNSNCRTETNTNQPPQVLNSERYLQQDIDSTTTRHALLQLAWKNGLPFF 569
+ R S +SN + TN+N P L E+ +QD T A+ QL +NG+P F
Sbjct: 443 PSKARSS-----SSNPKPITNSNVP---LQDEK--KQDASRTL---AIFQLTIRNGIPLF 489
Query: 570 ML------SCGSDILVATVRRKGISDNNDLESTYTLFGVEE-PKKRGGAWIKAGNKNKKD 622
S IL AT++ S +D T + V E KK+ G+W+ G++ K
Sbjct: 490 QFVVDDNSSSSRSILGATMKSSDSSFKDDSVQYCTFYSVNEVKKKKSGSWLIHGHREKHC 549
Query: 623 QLVYNIVGEMRVSHRKSRCYQAEKNHLHREFVLVGSEQLPSSEESGDSHVSREFAAFISA 682
VYNI+G+M++ + S +K+ + + SEQ+ +E ++A
Sbjct: 550 GFVYNIIGQMQLGNSMSVDISEQKSLITESVLFDESEQVKGRKE-------------VAA 596
Query: 683 VSQQEPETXXXXXXXXXXXXXXTPTDCSCPLGNFHPNTRDDSCASSSVLAVLPNGFHGTS 742
V ++ P+ + + + S ++P G H
Sbjct: 597 VVIKKK-----------------------PVEGSYTSFEETS-------VIIPGGVHSFP 626
Query: 743 TSGQPLPLIERWKSGGACDCGGWDEGCMLSVLSDDARENKGDKSTQANQTTDGSQRFDLF 802
G P PLI RW+SGG CDCGGWD GC L VLS+ +K ++S F LF
Sbjct: 627 EKGAPSPLISRWRSGGLCDCGGWDVGCKLHVLSNKTVLHKFNQS------------FTLF 674
Query: 803 VQGRSREDKH-AFSMVSFREGLYTVEFRSSIALLQAFAMCIVMLHGRRPTRTQAGVHASQ 861
Q S +D A +M + G+Y VEF S ++ LQAF +C+ +L AS+
Sbjct: 675 DQEVSEQDSSPALAMTELKTGIYRVEFGSFVSPLQAFFVCVTVL-----------TCASK 723
Query: 862 EHASLADHKLNKIMAASQGRAQASYVPHRPPLSPVGRA 899
A + G++ + P PPLSPVGR
Sbjct: 724 --------------AKTTGKSSS---PMAPPLSPVGRV 744
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 92 DELVKHMSNVPSYLQR---KETSGHLQDKALNVGVLEWGLLARWSH 134
DELVK+MS +P YLQR E S H Q LNVGVL+W L RW H
Sbjct: 39 DELVKYMSKLPGYLQRIERGEESVH-QSNVLNVGVLDWESLQRWKH 83
>AT2G37930.1 | chr2:15873284-15874770 FORWARD LENGTH=468
Length = 467
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 147/350 (42%), Gaps = 98/350 (28%)
Query: 555 HALLQLAWKNGLPFFMLSCG---SDILVATVRRKGISDNNDLESTYTLFGVEEPKKRGGA 611
HALLQ + G+ F G +++L AT++ S +YTL+ V E K + G
Sbjct: 211 HALLQFTLRKGINLFQFVVGDNSNNVLAATMKSSDSSTR-----SYTLYTVNEVKNKTGN 265
Query: 612 WIKAGNKNKKDQLVYNIVGEMRVSHRKSRCYQAEKNHLHREFVLVGSEQLPSSEESGDSH 671
W+ + +KN+ V+ I+GEM+ + ++ + E VL G +
Sbjct: 266 WL-SRHKNEHP-FVHTIIGEMKTV----TTFTSDSSIHKSETVLFGVDS----------- 308
Query: 672 VSREFAAFISAVSQQEPETXXXXXXXXXXXXXXTPTDCSCPLGNFHPNTRDDSCASSSVL 731
+ E AA + TR+ +
Sbjct: 309 TNEELAAIV--------------------------------------QTRN------TTT 324
Query: 732 AVLPNGFHGTSTSGQ--PLPLIERWKSGGACDCGGWDEGCMLSVLSDDARENKGDKSTQA 789
+LP+G H G PLPLI RWK+GG CDCGGWD GC L VLS + + + S
Sbjct: 325 IILPSGVHTLPKDGNNSPLPLINRWKTGGECDCGGWDIGCKLRVLSYNHTKTQTLSS--- 381
Query: 790 NQTTDGSQRFDLFVQGRSREDKHAFSMVSFREGLYTVEFRSSIALLQAFAMCIVMLHGRR 849
F LF Q R D+ AF MVS + L++VEF SSI+LL+AF + + +
Sbjct: 382 ---------FQLFDQER---DEPAFKMVSHGDELHSVEFGSSISLLEAFFISLAVTSH-- 427
Query: 850 PTRTQAGVHASQEHASLADHKLNKIMAASQGRAQASYVPHRPPLSPVGRA 899
++ +E + D L + A Y + PP+SP+GR
Sbjct: 428 --QSWCQEEEEEEVVVIGDCLLKR-------ETPAKYATN-PPVSPIGRV 467
>AT1G04490.1 | chr1:1218020-1219325 REVERSE LENGTH=402
Length = 401
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 722 DDSCASSSVLAVLPNGFHGTSTSGQPLPLIERWKSGGACDCGGWDEGCMLSVLSDDAREN 781
+ S +S S+ V+P+G HG G P LIERWKS G CDCGGWD C L++L R++
Sbjct: 282 ETSTSSISMNVVIPSGIHGGPEDG-PSSLIERWKSQGNCDCGGWDLCCSLTLLKGQPRKD 340
Query: 782 KGDKSTQANQTTDGSQRFDLFVQGRSREDKHAFSMVSFREGLYTVEFRSSIALLQAFAMC 841
Q F+LF++G S+ + +V+ GLY V+F + + LQ+FA+
Sbjct: 341 ---------------QYFELFIEG-SKHETTGLKIVNVSGGLYLVQFEAKLTSLQSFAIA 384
Query: 842 IVMLHGRR 849
+ +H +
Sbjct: 385 LAFIHSEK 392
>AT2G33360.1 | chr2:14140901-14142870 FORWARD LENGTH=604
Length = 603
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 12/122 (9%)
Query: 727 SSSVLAVLPNGFHG--TSTSGQPLPLIERWKSGGACDCGGWDEGCMLSVLSDDARENKGD 784
S+S+ V+P G HG + +G P LI+RWKSGG CDC GWD GC L+VL AR+
Sbjct: 475 STSIDVVIPLGIHGGPRNRNGGPSSLIQRWKSGGCCDCSGWDLGCPLTVLKGQARK---- 530
Query: 785 KSTQANQTTDGSQRFDLFVQGRSREDKHAFSMVSFREGLYTVEFRSSIALLQAFAMCIVM 844
+Q+ F+LF +G + +++ R+GLY V+ ++ I++LQ+F++ +
Sbjct: 531 -----DQSEGQCNLFELFTEGL-MQGSPGLRIMNVRDGLYFVQSQAKISVLQSFSIALAY 584
Query: 845 LH 846
+H
Sbjct: 585 IH 586
>AT1G63520.1 | chr1:23560205-23561873 FORWARD LENGTH=529
Length = 528
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 732 AVLPNGFHGT--STSGQPLPLIERWKSGGACDCGGWDEGCMLSVLSDDARENKGDKSTQA 789
++P G HG + + P P+++RW+SGG CDC GWD GC L VL ++
Sbjct: 376 VIVPTGNHGLPDTENSCPTPILQRWRSGGGCDCSGWDMGCHLFVL-------------ES 422
Query: 790 NQTTDGSQRFDLFVQGRSREDKHAFSMVSFREGLYTVEFRSSIALLQAFAMCIVMLHGRR 849
+ + +LF++ +E A +M REG Y V+F + ++ LQAF++C+ L
Sbjct: 423 PELINNHHGLELFIES-GKEITPAMTMTCIREGHYEVKFHAKLSALQAFSICVAELQRTE 481
Query: 850 PTRTQAGVHASQ 861
+R + + S+
Sbjct: 482 VSRGERNISLSR 493
>AT4G11450.1 | chr4:6959065-6961223 REVERSE LENGTH=695
Length = 694
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 732 AVLPNGFHG--TSTSGQPLPLIERWKSGGACDCGGWDEGCMLSVLSDDARENKGDKSTQA 789
V+P G HG T+ + P PLI+RW+SGG CDCGGWD C L VL + D+
Sbjct: 514 VVIPRGNHGLPTTENSCPSPLIQRWRSGGGCDCGGWDMACPLMVLGNPRISCSHDQPLVE 573
Query: 790 NQTTDGSQRFDLFVQGRSREDKHAFSMVSFREGLYTVEFRSSIALLQAFAMCIVMLHG 847
NQ LFVQG ++E A M EG Y V F + ++ LQAF++C+ +LH
Sbjct: 574 NQ-----HPLQLFVQG-AKEHIPALYMSFVEEGQYDVHFHAQLSTLQAFSICVAILHN 625
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.129 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,832,385
Number of extensions: 858557
Number of successful extensions: 1734
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1718
Number of HSP's successfully gapped: 11
Length of query: 899
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 792
Effective length of database: 8,173,057
Effective search space: 6473061144
Effective search space used: 6473061144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 116 (49.3 bits)