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Os03g0266000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ovarian tumour, otubain domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.016) R2 : 0.763
β1 : -1.21 (0.0585) R2dD : 0.23 R2D : 0.146
β2 : 1.26 (0.0416) R2dC : 0.478 R2C : 0.472
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.438 (0.0341) R2dN8 : 0.115 R2N8 : 0.0435
σ : 0.3
deviance : 41.1
__
_____
C
peak time of C : 17.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.76 0.289 11.2 -1.26 1.19 -0.528 -0.329 0.0933 -0.474 19.5 0.1502 138 -- --
37.78 0.286 11.2 -1.27 1.18 -0.53 -0.267 -- -0.473 19.5 0.19 145 -- --
37.97 0.287 11.2 -1.25 1.17 -0.518 -- 0.00412 -0.469 19.5 0.2169 148 -- --
37.97 0.287 11.2 -1.25 1.17 -0.521 -- -- -0.468 19.5 0.2191 148 -- --
41.58 0.3 11.2 -1.22 -- -1.48 -- 0.885 -0.533 -- 1.99 714 -- --
41.08 0.3 11.2 -1.21 1.26 -- -0.0765 -- -0.438 17.6 -- -- -- --
41.1 0.3 11.2 -1.21 1.26 -- -- -- -0.438 17.6 -- -- -- --
39.81 0.294 11.2 -1.32 -- -1.53 -- -- -0.504 -- 1.778 714 -- --
79.2 0.417 11.2 -- 1.28 -0.107 -- -- -0.305 17.9 1.066 190 -- --
123.46 0.519 11.2 -1.25 -- -- -- -- -0.468 -- -- -- -- --
79.45 0.417 11.2 -- 1.28 -- -- -- -0.303 17.5 -- -- -- --
84.85 0.429 11.2 -- -- -1.44 -- -- -0.363 -- 2.53 682 -- --
164.49 0.599 11.2 -- -- -- -- -- -0.33 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.34 temperature 15.0 270 > th dose dependent rect. 4 9
5 36.49 temperature 20.0 270 > th dose dependent rect. 6 7
9 36.56 temperature 10.0 270 > th dose dependent rect. 18 19
18 36.73 radiation 30.0 14400 < th dose independent rect. 17 3
29 36.88 temperature 25.0 270 > th dose independent rect. 14 4
33 36.92 temperature 15.0 90 > th dose independent rect. 19 20
39 37.01 temperature 15.0 270 > th dose independent rect. 17 21
44 37.05 temperature 20.0 90 > th dose dependent rect. 16 3
53 37.14 temperature 25.0 90 > th dose independent rect. 16 3
62 37.20 temperature 25.0 90 > th dose dependent rect. 16 15
66 37.22 wind 1.0 1440 < th dose independent rect. 6 1
75 37.25 radiation 1.0 270 > th dose independent rect. 14 4
77 37.25 radiation 1.0 270 < th dose dependent sin 15 NA
79 37.25 radiation 1.0 90 < th dose dependent rect. 19 22
99 37.30 radiation 1.0 270 > th dose independent rect. 14 16
103 37.32 wind 1.0 1440 < th dose dependent rect. 6 1
104 37.32 temperature 20.0 10 > th dose dependent rect. 16 3
107 37.33 wind 1.0 1440 > th dose independent rect. 6 1
108 37.33 temperature 25.0 270 > th dose independent rect. 13 12
118 37.35 radiation 1.0 270 < th dose independent sin 15 NA
128 37.36 temperature 25.0 10 > th dose dependent rect. 16 15
130 37.37 radiation 1.0 270 > th dose independent sin 15 NA
132 37.37 temperature 25.0 270 > th dose independent rect. 6 7
152 37.38 radiation 1.0 90 < th dose independent rect. 19 22
160 37.41 temperature 25.0 270 > th dose independent rect. 13 17
183 37.45 radiation 30.0 90 < th dose independent rect. 15 4
187 37.45 temperature 25.0 10 > th dose dependent rect. 7 8
229 37.51 humidity 50.0 90 > th dose independent rect. 19 20
242 37.54 temperature 25.0 90 > th dose dependent rect. 16 11
262 37.57 humidity 90.0 30 < th dose independent rect. 16 3
270 37.57 radiation 1.0 270 < th dose dependent rect. 4 23
276 37.59 radiation 1.0 720 < th dose independent rect. 14 15
288 37.60 temperature 25.0 90 > th dose dependent rect. 19 20
295 37.62 temperature 25.0 90 > th dose independent rect. 16 15
299 37.62 temperature 30.0 270 < th dose dependent rect. 24 10
314 37.65 temperature 25.0 270 > th dose independent rect. 2 11
321 37.66 radiation 10.0 10 < th dose independent rect. 16 3
328 37.67 wind 7.0 90 < th dose independent rect. 15 4
339 37.67 radiation 1.0 270 < th dose dependent rect. 11 16
352 37.69 humidity 50.0 270 > th dose independent rect. 17 21
353 37.69 radiation 1.0 270 > th dose independent rect. 9 23
371 37.70 wind 9.0 90 < th dose independent rect. 19 20
377 37.71 wind 1.0 90 > th dose independent rect. 15 4
380 37.71 radiation 1.0 90 < th dose independent rect. 19 12
392 37.72 radiation 1.0 270 > th dose independent rect. 11 21
393 37.72 temperature 25.0 90 > th dose dependent sin 6 NA
394 37.72 radiation 40.0 90 < th dose dependent rect. 15 4
405 37.73 temperature 10.0 90 > th dose independent rect. 15 4
407 37.73 atmosphere 1010.0 90 < th dose independent rect. 15 4
409 37.73 precipitation 0.1 90 < th dose independent rect. 15 4
413 37.73 precipitation 0.1 90 < th dose dependent rect. 15 4
431 37.74 radiation 1.0 90 < th dose dependent rect. 19 12
433 37.74 radiation 1.0 90 < th dose dependent rect. 19 15
442 37.75 radiation 1.0 720 < th dose independent rect. 11 18
443 37.75 atmosphere 995.0 90 > th dose independent rect. 19 20
467 37.77 radiation 1.0 720 < th dose independent rect. 17 12
471 37.77 atmosphere 995.0 270 > th dose independent rect. 17 21
482 37.78 radiation 1.0 90 > th dose independent rect. 16 14
486 37.78 wind 9.0 270 < th dose dependent rect. 14 3
502 37.79 radiation 1.0 90 < th dose independent rect. 19 14
515 37.80 temperature 15.0 90 > th dose independent rect. 19 10
520 37.80 wind 9.0 10 < th dose independent rect. 19 21
523 37.80 radiation 40.0 10 < th dose dependent rect. 16 3
531 37.81 temperature 25.0 270 < th dose independent rect. 1 9
532 37.81 temperature 15.0 270 > th dose independent rect. 8 14
554 37.82 atmosphere 1015.0 30 < th dose dependent rect. 16 3
574 37.83 wind 7.0 720 < th dose independent rect. 13 5
613 37.85 humidity 50.0 10 > th dose independent rect. 16 3
618 37.85 radiation 1.0 720 < th dose independent rect. 14 7
640 37.86 temperature 20.0 720 > th dose independent rect. 1 5
656 37.87 radiation 10.0 10 < th dose independent rect. 8 11
671 37.88 temperature 25.0 10 > th dose dependent rect. 16 10
689 37.89 radiation 10.0 10 < th dose independent rect. 6 13
703 37.90 wind 5.0 270 < th dose independent rect. 22 10
717 37.90 radiation 1.0 720 < th dose dependent rect. 7 22
719 37.91 wind 1.0 43200 > th dose independent rect. 5 6
723 37.91 wind 3.0 90 > th dose independent rect. 19 21
739 37.92 wind 1.0 43200 < th dose independent rect. 5 7
741 37.92 radiation 1.0 720 < th dose independent rect. 11 10
743 37.92 wind 5.0 270 < th dose independent rect. 14 17
748 37.92 temperature 10.0 720 > th dose dependent rect. 1 5
815 37.95 wind 9.0 270 < th dose independent rect. 17 21
828 37.96 radiation 1.0 1440 < th dose independent rect. 9 4
837 37.96 radiation 1.0 1440 < th dose dependent rect. 9 4
846 37.97 temperature 20.0 720 > th dose independent rect. 3 2
847 37.97 wind 1.0 43200 > th dose independent rect. 6 3
914 38.00 wind 1.0 43200 < th dose independent rect. 6 4
923 38.00 precipitation 0.1 90 < th dose independent rect. 19 20
939 38.00 precipitation 0.1 90 < th dose dependent rect. 19 20
963 38.02 temperature 10.0 1440 > th dose independent rect. 17 3
966 38.02 radiation 30.0 1440 < th dose independent rect. 17 3
974 38.02 atmosphere 1005.0 30 > th dose independent rect. 24 8
979 38.02 temperature 10.0 1440 > th dose independent rect. 20 21
982 38.02 radiation 1.0 270 < th dose independent rect. 4 23
984 38.02 wind 1.0 90 > th dose dependent rect. 16 3
985 38.02 humidity 90.0 30 < th dose dependent rect. 16 3
990 38.02 atmosphere 1000.0 10 > th dose dependent rect. 24 10
992 38.02 temperature 25.0 270 > th dose dependent rect. 14 17
999 38.03 atmosphere 995.0 30 > th dose independent rect. 16 3