Os03g0262900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Vacuolar sorting protein 9 domain containing protein.
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Os03g0262900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Vacuolar sorting protein 9 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.21 | 0.309 | 8.55 | -0.0282 | 1.12 | 1.19 | -0.429 | -1.15 | -0.109 | 6.55 | 19.22 | 376 | -- | -- |
| 43.41 | 0.307 | 8.52 | 0.172 | 1.12 | 1.33 | -0.111 | -- | -0.0355 | 6.67 | 16.1 | 423 | -- | -- |
| 43.53 | 0.307 | 8.54 | 0.031 | 1.12 | 1.19 | -- | -0.782 | -0.0895 | 6.67 | 19 | 400 | -- | -- |
| 43.3 | 0.306 | 8.52 | 0.155 | 1.11 | 1.32 | -- | -- | -0.0477 | 6.86 | 16.12 | 457 | -- | -- |
| 70.63 | 0.391 | 8.57 | -0.0707 | -- | 0.952 | -- | -0.5 | -0.0782 | -- | 16.69 | 2830 | -- | -- |
| 65.42 | 0.379 | 8.48 | 0.47 | 0.725 | -- | -0.335 | -- | 0.155 | 7.1 | -- | -- | -- | -- |
| 65.7 | 0.38 | 8.48 | 0.464 | 0.724 | -- | -- | -- | 0.156 | 7.19 | -- | -- | -- | -- |
| 70.67 | 0.392 | 8.55 | 0.0479 | -- | 1.02 | -- | -- | -0.049 | -- | 15.65 | 2845 | -- | -- |
| 43.82 | 0.308 | 8.53 | -- | 1.13 | 1.39 | -- | -- | -0.0782 | 6.9 | 15.8 | 472 | -- | -- |
| 93.38 | 0.452 | 8.5 | 0.478 | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
| 71.38 | 0.395 | 8.49 | -- | 0.728 | -- | -- | -- | 0.104 | 7.14 | -- | -- | -- | -- |
| 70.71 | 0.392 | 8.55 | -- | -- | 1.07 | -- | -- | -0.0573 | -- | 14.12 | 2847 | -- | -- |
| 99.4 | 0.465 | 8.51 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 2 | 37.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 5 | 37.86 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 8 | 38.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 13 | 38.07 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 25 | 38.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 32 | 38.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 33 | 38.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 15 |
| 52 | 38.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 59 | 38.81 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 184 | 40.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 260 | 40.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 294 | 40.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 301 | 40.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 2 |
| 355 | 41.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 415 | 41.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 461 | 41.39 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 502 | 41.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 686 | 41.90 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |