Os03g0259700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1630 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0259700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1630 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.03 | 0.319 | 8.77 | 0.366 | 1.37 | -0.37 | -0.419 | 2.27 | 0.118 | 4.98 | 22.29 | 1402 | -- | -- |
| 51.32 | 0.334 | 8.82 | -0.0132 | 1.42 | -0.694 | -0.446 | -- | 0.00756 | 5.24 | 14.9 | 28207 | -- | -- |
| 46.06 | 0.316 | 8.76 | 0.426 | 1.35 | -0.361 | -- | 2.33 | 0.138 | 4.95 | 22.2 | 1989 | -- | -- |
| 49.15 | 0.327 | 8.8 | 0.327 | 1.39 | -1.07 | -- | -- | 0.0958 | 5.26 | 14.9 | 29610 | -- | -- |
| 97.9 | 0.461 | 8.8 | -0.2 | -- | -0.76 | -- | 0.323 | 0.124 | -- | 26.3 | 180 | -- | -- |
| 63.68 | 0.374 | 8.87 | -0.517 | 1.36 | -- | -0.273 | -- | -0.191 | 5.03 | -- | -- | -- | -- |
| 63.87 | 0.374 | 8.87 | -0.517 | 1.36 | -- | -- | -- | -0.19 | 5.01 | -- | -- | -- | -- |
| 94.52 | 0.453 | 8.83 | -0.232 | -- | -0.964 | -- | -- | 0.0756 | -- | 26.53 | 271 | -- | -- |
| 49.54 | 0.328 | 8.81 | -- | 1.43 | -1.08 | -- | -- | 0.0376 | 4.97 | 14.6 | 29655 | -- | -- |
| 161.08 | 0.593 | 8.88 | -0.468 | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
| 70.91 | 0.394 | 8.86 | -- | 1.35 | -- | -- | -- | -0.132 | 5.03 | -- | -- | -- | -- |
| 95.9 | 0.456 | 8.83 | -- | -- | -0.984 | -- | -- | 0.105 | -- | 26.5 | 270 | -- | -- |
| 166.86 | 0.603 | 8.87 | -- | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.94 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 8 | 43.10 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 21 | 43.24 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 31 | 43.36 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 61 | 43.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 66 | 43.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 115 | 43.87 | humidity | 90 | 14400 | > th | dose independent | sin | 10 | NA |
| 136 | 43.94 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 154 | 44.03 | wind | 3 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 160 | 44.06 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 163 | 44.07 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 186 | 44.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 190 | 44.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 215 | 44.28 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 220 | 44.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 228 | 44.32 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 256 | 44.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 270 | 44.50 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 276 | 44.54 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 294 | 44.59 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 304 | 44.61 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 307 | 44.62 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 310 | 44.64 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 320 | 44.70 | humidity | 60 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 348 | 44.79 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 359 | 44.82 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 394 | 44.92 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 420 | 45.03 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 453 | 45.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 465 | 45.21 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 477 | 45.26 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 487 | 45.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 494 | 45.35 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 496 | 45.35 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 501 | 45.37 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 502 | 45.38 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 509 | 45.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 524 | 45.41 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 576 | 45.56 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 596 | 45.60 | wind | 3 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 604 | 45.62 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 636 | 45.69 | humidity | 90 | 14400 | < th | dose independent | sin | 10 | NA |
| 640 | 45.70 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 647 | 45.72 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 659 | 45.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 673 | 45.77 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 750 | 45.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 769 | 45.95 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 770 | 45.95 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 771 | 45.95 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 782 | 45.97 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 825 | 46.03 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 854 | 46.05 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 883 | 46.10 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 916 | 46.14 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 924 | 46.15 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 936 | 46.16 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 967 | 46.21 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 979 | 46.22 | humidity | 50 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 983 | 46.22 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 984 | 46.23 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 1 |