Os03g0255500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment).
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Os03g0255500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphoenolpyruvate carboxykinase 4 (EC 4.1.1.49) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.54 | 0.569 | 13 | 1.98 | 2.18 | -2.49 | -0.275 | 1.86 | 1.07 | 1.02 | 23.2 | 9 | -- | -- |
| 147.68 | 0.57 | 13 | 1.69 | 2.2 | -2.37 | -0.615 | -- | 0.985 | 1.08 | 23 | 8 | -- | -- |
| 146.18 | 0.567 | 13 | 2.02 | 2.18 | -2.53 | -- | 2.2 | 1.08 | 1.03 | 23.2 | 8 | -- | -- |
| 149.22 | 0.573 | 13 | 1.71 | 2.21 | -2.35 | -- | -- | 0.983 | 1.05 | 23.05 | 8 | -- | -- |
| 347.33 | 0.873 | 12.9 | 2.74 | -- | -4.64 | -- | 4.74 | 1.45 | -- | 23.44 | 7 | -- | -- |
| 234.03 | 0.717 | 13.1 | 1.27 | 3.06 | -- | -0.185 | -- | 0.644 | 1.53 | -- | -- | -- | -- |
| 234.17 | 0.717 | 13.1 | 1.28 | 3.06 | -- | -- | -- | 0.645 | 1.53 | -- | -- | -- | -- |
| 359.08 | 0.886 | 12.9 | 2.21 | -- | -4.37 | -- | -- | 1.39 | -- | 21.4 | 7 | -- | -- |
| 221.38 | 0.697 | 13.1 | -- | 2.41 | -1.87 | -- | -- | 0.716 | 1.18 | 23.5 | 8 | -- | -- |
| 809.42 | 1.33 | 13.1 | 1.4 | -- | -- | -- | -- | 0.711 | -- | -- | -- | -- | -- |
| 277.35 | 0.779 | 13.1 | -- | 3.09 | -- | -- | -- | 0.502 | 1.54 | -- | -- | -- | -- |
| 471.02 | 1.01 | 13 | -- | -- | -3.97 | -- | -- | 0.939 | -- | 23.9 | 3 | -- | -- |
| 861.31 | 1.37 | 13.1 | -- | -- | -- | -- | -- | 0.556 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.69 | temperature | 10 | 10 | > th | dose dependent | sin | 22 | NA |
| 13 | 147.35 | humidity | 60 | 10 | > th | dose dependent | sin | 21 | NA |
| 28 | 149.69 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 41 | 151.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 51 | 152.20 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 57 | 152.55 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 64 | 152.92 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 65 | 152.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 69 | 153.21 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 71 | 153.26 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 75 | 153.37 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 110 | 154.32 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 113 | 154.37 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 199 | 156.04 | humidity | 70 | 90 | > th | dose dependent | rect. | 7 | 14 |
| 221 | 156.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 17 |
| 230 | 156.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 14 |
| 332 | 158.31 | humidity | 70 | 90 | > th | dose dependent | rect. | 9 | 12 |
| 340 | 158.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 358 | 158.63 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 500 | 160.42 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 531 | 160.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 555 | 161.25 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 14 |
| 566 | 161.45 | humidity | 90 | 10 | < th | dose dependent | sin | 21 | NA |
| 579 | 161.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 616 | 162.12 | humidity | 60 | 10 | > th | dose dependent | rect. | 7 | 16 |
| 720 | 163.57 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 883 | 166.02 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 13 |
| 902 | 166.26 | humidity | 80 | 90 | > th | dose independent | sin | 22 | NA |