BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0255500 Os03g0255500|AK102392
         (663 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37870.1  | chr4:17802974-17806332 REVERSE LENGTH=672         1041   0.0  
AT5G65690.1  | chr5:26266477-26269486 FORWARD LENGTH=671         1019   0.0  

>AT4G37870.1 | chr4:17802974-17806332 REVERSE LENGTH=672
          Length = 671

 Score = 1041 bits (2691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/663 (76%), Positives = 546/663 (82%), Gaps = 9/663 (1%)

Query: 3   STPNG--LARIETHGAKTKKHENGICHDDSSAPVRAQTIDELHSLQRKRSAPTTPIKDGA 60
           S P G  + +I T  AK     +G+CHDDS   V A TIDELHSLQ+KRSAPTTPI   A
Sbjct: 16  SFPKGPVMPKITTGAAK---RGSGVCHDDSGPTVNATTIDELHSLQKKRSAPTTPINQNA 72

Query: 61  SSPFXXXXXXXXXXXXXXXXXXXXXXXXTRETGPKVVRGDPARKGEAAAKGAXXXXXXXX 120
           ++                          TRE+GPKVVRGDPA K      G+        
Sbjct: 73  AA-AFAAVSEEERQKIQLQSISASLASLTRESGPKVVRGDPAEK---KTDGSTTPAYAHG 128

Query: 121 XXXXXXXXXXIAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALATLSGAKTG 180
                      AVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITS GALATLSGAKTG
Sbjct: 129 QHHSIFSPATGAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSNGALATLSGAKTG 188

Query: 181 RSPRDKRIVKDEASAQELWWGKGSPNIEMDEHTFLTNRERAVDYLNSLDKVFVNDQFLNW 240
           R+PRDKR+V+D  +  ELWWGKGSPNIEMDEHTF+ NRERAVDYLNSL+KVFVNDQ+LNW
Sbjct: 189 RAPRDKRVVRDATTEDELWWGKGSPNIEMDEHTFMVNRERAVDYLNSLEKVFVNDQYLNW 248

Query: 241 DTENRIKVRIISARAYHSLFMHNMCIRPTEEELEEFGTPDFTIYNAGQFPCNRYTHYMTS 300
           D ENRIKVRI+SARAYHSLFMHNMCIRPT+EELE FGTPDFTIYNAGQFPCNRYTHYMTS
Sbjct: 249 DPENRIKVRIVSARAYHSLFMHNMCIRPTQEELESFGTPDFTIYNAGQFPCNRYTHYMTS 308

Query: 301 STSVDINLARREMVILGTQYAGEMKKGLFGVMHYLMPRRGILSLHSGCNMGKQGDVAXXX 360
           STSVD+NLARREMVILGTQYAGEMKKGLF VMHYLMP+R ILSLHSGCNMGK GDVA   
Sbjct: 309 STSVDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRRILSLHSGCNMGKDGDVALFF 368

Query: 361 XXXXXXXXXXXXDHNRLLIGDDEHCWSDTGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFG 420
                       DHNR LIGDDEHCW++TGVSNIEGGCYAKC+DLS+EKEPDIWNAIKFG
Sbjct: 369 GLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEGGCYAKCVDLSREKEPDIWNAIKFG 428

Query: 421 TVLENVVFDEHTREVDYTDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGV 480
           TVLENVVFDEHTREVDY+DKSVTENTRAAYPIE+IPNAKIPCVGPHP NVILLACDAFGV
Sbjct: 429 TVLENVVFDEHTREVDYSDKSVTENTRAAYPIEFIPNAKIPCVGPHPTNVILLACDAFGV 488

Query: 481 LPPVSKLNLPQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLAE 540
           LPPVSKLNL QTMYHFISGYTALVAGTEDGIKEP ATFSACFGAAFIMLHPTKYAAMLAE
Sbjct: 489 LPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAE 548

Query: 541 KMQKYGATGWLVNTGWSGGRYGVGKRIRLPYTRKIIDAIHSGELLTANYKKTEVFGLEIP 600
           KM+  GATGWLVNTGWSGG YGVG RI+L YTRKIIDAIHSG LL ANYKKTE+FG EIP
Sbjct: 549 KMKSQGATGWLVNTGWSGGSYGVGNRIKLAYTRKIIDAIHSGSLLKANYKKTEIFGFEIP 608

Query: 601 TEIDGIPSEILDPINTWTDKGAYKETLLKLAGLFKKNFEVFANYKIGGDSSLTDKILAAG 660
           TEI+GIPSEILDP+N+W+DK A+K+TL+KL GLFKKNFEVFAN+KIG D  LT++ILAAG
Sbjct: 609 TEIEGIPSEILDPVNSWSDKKAHKDTLVKLGGLFKKNFEVFANHKIGVDGKLTEEILAAG 668

Query: 661 PNF 663
           P F
Sbjct: 669 PIF 671



>AT5G65690.1 | chr5:26266477-26269486 FORWARD LENGTH=671
          Length = 670

 Score = 1019 bits (2635), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/664 (73%), Positives = 540/664 (81%), Gaps = 13/664 (1%)

Query: 2   ASTPNGLARIETHGAKTKKHENGICHDDSSAPVRAQTIDELHSLQRKRSAPTTPIKDGAS 61
           A+  + L RI T           +C DD +  V  QTIDELHSLQ+KRSAPTTP++DG++
Sbjct: 18  AAARDALPRITTEKGGKSPGPADVCQDDIAPRVNFQTIDELHSLQKKRSAPTTPLRDGSA 77

Query: 62  SPFXXXX--XXXXXXXXXXXXXXXXXXXXTRETGPKVVRGDPARKGEAAAKGAXXXXXXX 119
           S                            TRETGPK++RGDP     +AAK A       
Sbjct: 78  SGVSGTSGPTTPVSSETMLQSVSASLASLTRETGPKLIRGDPT----SAAKVAHVPVTPT 133

Query: 120 XXXXXXXXXXXIAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALATLSGAKT 179
                        VSDS LKFTH+L+NLSPAELYEQAIK+EKGSF+TSTGALATLSGAKT
Sbjct: 134 SLPAAD-------VSDSGLKFTHILHNLSPAELYEQAIKFEKGSFVTSTGALATLSGAKT 186

Query: 180 GRSPRDKRIVKDEASAQELWWGKGSPNIEMDEHTFLTNRERAVDYLNSLDKVFVNDQFLN 239
           GRSP+DKR+VKD+ +  ELWWGKGSPNIEMDE TFL NRERAVDYLNSLDKVFVNDQ+LN
Sbjct: 187 GRSPKDKRVVKDDTTEAELWWGKGSPNIEMDEKTFLVNRERAVDYLNSLDKVFVNDQYLN 246

Query: 240 WDTENRIKVRIISARAYHSLFMHNMCIRPTEEELEEFGTPDFTIYNAGQFPCNRYTHYMT 299
           WD EN+IKVRI+SARAYHSLFMHNMCIRPT EELE FGTPDFTIYNAG+FPCNR+THYMT
Sbjct: 247 WDPENKIKVRIVSARAYHSLFMHNMCIRPTPEELENFGTPDFTIYNAGKFPCNRFTHYMT 306

Query: 300 SSTSVDINLARREMVILGTQYAGEMKKGLFGVMHYLMPRRGILSLHSGCNMGKQGDVAXX 359
           SSTSVDINL RREMVILGTQYAGEMKKGLFGVMHYLMP+R ILSLHSGCNMGK GDVA  
Sbjct: 307 SSTSVDINLGRREMVILGTQYAGEMKKGLFGVMHYLMPKRKILSLHSGCNMGKDGDVALF 366

Query: 360 XXXXXXXXXXXXXDHNRLLIGDDEHCWSDTGVSNIEGGCYAKCIDLSQEKEPDIWNAIKF 419
                        DHNR LIGDDEHCWS+ GVSNIEGGCYAKCIDL+++KEPDIWNAIKF
Sbjct: 367 FGLSGTGKTTLSTDHNRYLIGDDEHCWSEAGVSNIEGGCYAKCIDLARDKEPDIWNAIKF 426

Query: 420 GTVLENVVFDEHTREVDYTDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFG 479
           GTVLENVVFDEHTREVDYTDKSVTENTRAAYPIEYIPN+KIPCVGPHPKNVILLACDAFG
Sbjct: 427 GTVLENVVFDEHTREVDYTDKSVTENTRAAYPIEYIPNSKIPCVGPHPKNVILLACDAFG 486

Query: 480 VLPPVSKLNLPQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLA 539
           VLPP+SKLNL QTMYHFISGYTALVAGTE+G+KEP+ATFSACFGAAFIMLHPTKYAAMLA
Sbjct: 487 VLPPISKLNLAQTMYHFISGYTALVAGTEEGVKEPRATFSACFGAAFIMLHPTKYAAMLA 546

Query: 540 EKMQKYGATGWLVNTGWSGGRYGVGKRIRLPYTRKIIDAIHSGELLTANYKKTEVFGLEI 599
           EKMQ  GATGWLVNTGWSGG YG G RI+L YTRKIIDAIHSG LL A+Y+KT++FGLEI
Sbjct: 547 EKMQAQGATGWLVNTGWSGGSYGTGSRIKLAYTRKIIDAIHSGSLLNASYRKTDIFGLEI 606

Query: 600 PTEIDGIPSEILDPINTWTDKGAYKETLLKLAGLFKKNFEVFANYKIGGDSSLTDKILAA 659
           P E++G+PSEIL+PIN W DK AY++TLLKLAGLFK NFE F ++KIG D  LT++ILAA
Sbjct: 607 PNEVEGVPSEILEPINAWPDKMAYEDTLLKLAGLFKSNFETFTSHKIGDDGKLTEEILAA 666

Query: 660 GPNF 663
           GPNF
Sbjct: 667 GPNF 670



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.134    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,622,162
Number of extensions: 557953
Number of successful extensions: 1119
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1115
Number of HSP's successfully gapped: 2
Length of query: 663
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 558
Effective length of database: 8,227,889
Effective search space: 4591162062
Effective search space used: 4591162062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)