Os03g0251800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Possible OmpA family member precursor.
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Os03g0251800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Possible OmpA family member precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.64 | 0.464 | 6.89 | -1.61 | 2.21 | -2.27 | 0.199 | -5.23 | 0.169 | 3.33 | 0.4788 | 4373 | -- | -- |
| 118.47 | 0.507 | 6.94 | -1.91 | 2.1 | -1 | 1.22 | -- | 0.172 | 3.65 | 2.817 | 4290 | -- | -- |
| 96.91 | 0.459 | 6.88 | -1.63 | 2.21 | -2.39 | -- | -5.57 | 0.179 | 3.33 | 0.2402 | 4372 | -- | -- |
| 110.8 | 0.49 | 6.99 | -2.29 | 2.65 | -1.84 | -- | -- | 0.0011 | 4.47 | 2.64 | 5243 | -- | -- |
| 334.9 | 0.852 | 6.86 | -1.83 | -- | -2.6 | -- | -5.19 | 0.146 | -- | 0.2836 | 14314 | -- | -- |
| 137.93 | 0.551 | 6.96 | -2.02 | 2.15 | -- | 0.0856 | -- | 0.259 | 3.5 | -- | -- | -- | -- |
| 137.95 | 0.55 | 6.96 | -2.03 | 2.15 | -- | -- | -- | 0.259 | 3.5 | -- | -- | -- | -- |
| 332.93 | 0.854 | 6.95 | -1.93 | -- | 0.773 | -- | -- | 0.342 | -- | 3.305 | 15737 | -- | -- |
| 228.82 | 0.705 | 6.93 | -- | 2.52 | -1.4 | -- | -- | 0.316 | 4.2 | 9.996 | 3664 | -- | -- |
| 396.81 | 0.931 | 6.96 | -1.93 | -- | -- | -- | -- | 0.316 | -- | -- | -- | -- | -- |
| 246.07 | 0.734 | 6.91 | -- | 2.11 | -- | -- | -- | 0.484 | 3.5 | -- | -- | -- | -- |
| 387.94 | 0.92 | 6.91 | -- | -- | 1.18 | -- | -- | 0.518 | -- | 23.45 | 47520 | -- | -- |
| 495.56 | 1.04 | 6.91 | -- | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.21 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 17 | 90.77 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 18 | 90.78 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 44 | 91.35 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 45 | 91.36 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 54 | 91.49 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 64 | 91.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 66 | 91.52 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 111 | 92.43 | radiation | 1 | 14400 | < th | dose dependent | sin | 14 | NA |
| 113 | 92.43 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 141 | 92.53 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 149 | 92.55 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 182 | 92.68 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 212 | 92.79 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 226 | 92.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 9 |
| 230 | 92.83 | radiation | 1 | 14400 | < th | dose dependent | rect. | 9 | 14 |
| 277 | 92.94 | radiation | 1 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 314 | 93.12 | radiation | 1 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 383 | 93.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 17 |
| 385 | 93.29 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 21 |
| 387 | 93.30 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 15 |
| 394 | 93.30 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 402 | 93.31 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 458 | 93.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 4 | 20 |
| 510 | 93.60 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 20 |
| 568 | 93.80 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 22 |
| 587 | 93.87 | radiation | 1 | 14400 | < th | dose independent | sin | 14 | NA |
| 622 | 93.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 631 | 93.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 19 |
| 632 | 93.96 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 651 | 94.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 654 | 94.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 18 |
| 676 | 94.03 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 705 | 94.08 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 18 |
| 721 | 94.10 | radiation | 1 | 14400 | > th | dose independent | sin | 14 | NA |
| 764 | 94.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 786 | 94.17 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 796 | 94.19 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 806 | 94.19 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 837 | 94.21 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 18 |
| 874 | 94.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 900 | 94.26 | radiation | 1 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 922 | 94.27 | radiation | 1 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 944 | 94.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 975 | 94.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 22 |
| 981 | 94.33 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 20 |
| 986 | 94.34 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 991 | 94.34 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 20 |
| 994 | 94.34 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 996 | 94.34 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 998 | 94.34 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 18 |
| 1000 | 94.35 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |