Os03g0249100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0249100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.87 | 0.445 | 10.8 | -1.17 | 0.999 | 1.1 | -0.205 | -3.22 | -0.0828 | 7.49 | 26.1 | 1232 | -- | -- |
| 92.3 | 0.447 | 10.7 | -0.38 | 1.04 | 0.815 | -0.203 | -- | 0.112 | 7.59 | 26.49 | 1151 | -- | -- |
| 89.96 | 0.442 | 10.8 | -1.19 | 0.999 | 1.1 | -- | -3.3 | -0.0789 | 7.41 | 26.22 | 1231 | -- | -- |
| 92.23 | 0.447 | 10.7 | -0.392 | 1.02 | 0.79 | -- | -- | 0.109 | 7.44 | 26.43 | 1153 | -- | -- |
| 140.89 | 0.553 | 10.8 | -1.08 | -- | 1.01 | -- | -2.56 | -0.101 | -- | 25.28 | 1324 | -- | -- |
| 114.91 | 0.503 | 10.7 | -0.17 | 0.989 | -- | 0.302 | -- | 0.131 | 6.75 | -- | -- | -- | -- |
| 115.08 | 0.502 | 10.7 | -0.164 | 0.989 | -- | -- | -- | 0.131 | 6.87 | -- | -- | -- | -- |
| 143.05 | 0.557 | 10.7 | -0.389 | -- | 0.729 | -- | -- | 0.123 | -- | 26.4 | 1307 | -- | -- |
| 96.03 | 0.456 | 10.7 | -- | 0.995 | 0.708 | -- | -- | 0.155 | 7.4 | 26.6 | 1163 | -- | -- |
| 166.35 | 0.603 | 10.7 | -0.142 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 115.79 | 0.503 | 10.7 | -- | 0.987 | -- | -- | -- | 0.149 | 6.88 | -- | -- | -- | -- |
| 146.65 | 0.564 | 10.7 | -- | -- | 0.654 | -- | -- | 0.17 | -- | 26.59 | 1304 | -- | -- |
| 166.89 | 0.603 | 10.7 | -- | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.77 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 12 |
| 2 | 86.04 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 14 |
| 3 | 86.14 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 14 |
| 7 | 86.64 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 8 | 86.70 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 16 |
| 10 | 86.90 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 19 | 87.41 | temperature | 30.0 | 720 | < th | dose independent | sin | 13 | NA |
| 24 | 87.84 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 31 | 88.02 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 42 | 88.30 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 14 |
| 48 | 88.41 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 11 |
| 51 | 88.50 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 68 | 88.77 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 93 | 89.19 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 97 | 89.28 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 11 |
| 101 | 89.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 21 |
| 104 | 89.37 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 11 | 16 |
| 107 | 89.39 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 10 |
| 120 | 89.51 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 19 |
| 140 | 89.69 | humidity | 50.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 142 | 89.71 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 17 |
| 152 | 89.80 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 155 | 89.83 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 16 |
| 173 | 89.91 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 8 |
| 194 | 90.07 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 7 |
| 195 | 90.08 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 200 | 90.11 | humidity | 60.0 | 720 | > th | dose independent | rect. | 14 | 5 |
| 219 | 90.21 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 253 | 90.44 | wind | 7.0 | 43200 | < th | dose independent | rect. | 12 | 4 |
| 260 | 90.46 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 10 |
| 287 | 90.55 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 294 | 90.57 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 16 |
| 309 | 90.62 | wind | 7.0 | 43200 | > th | dose independent | rect. | 12 | 4 |
| 324 | 90.65 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 326 | 90.66 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 334 | 90.67 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 337 | 90.67 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 360 | 90.74 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 377 | 90.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 406 | 90.86 | humidity | 50.0 | 270 | > th | dose dependent | sin | 15 | NA |
| 416 | 90.88 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 451 | 90.95 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 456 | 90.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 498 | 91.06 | wind | 7.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 502 | 91.06 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 533 | 91.13 | wind | 7.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 639 | 91.32 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 673 | 91.41 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 684 | 91.43 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 732 | 91.51 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 738 | 91.52 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 4 |
| 757 | 91.55 | temperature | 30.0 | 720 | < th | dose independent | sin | 10 | NA |
| 775 | 91.57 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 793 | 91.60 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 891 | 91.74 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 7 |
| 903 | 91.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 15 |
| 905 | 91.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 947 | 91.84 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 19 |