Os03g0243800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor, PMP and SGCI repeat containing protein.
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Os03g0243800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor, PMP and SGCI repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.07 | 0.319 | 9.22 | -1.81 | 1.04 | 1.39 | -0.11 | -2.38 | -0.297 | 0.572 | 20.87 | 1504 | -- | -- |
| 50 | 0.329 | 9.15 | -1.17 | 0.941 | 1.75 | -0.4 | -- | -0.125 | 0.636 | 13.91 | 1342 | -- | -- |
| 46.09 | 0.316 | 9.22 | -1.83 | 1.04 | 1.38 | -- | -2.46 | -0.301 | 0.594 | 21.1 | 1504 | -- | -- |
| 49.57 | 0.328 | 9.14 | -1.16 | 0.975 | 1.77 | -- | -- | -0.119 | 0.394 | 13.74 | 1361 | -- | -- |
| 84.06 | 0.427 | 9.19 | -1.67 | -- | 2.16 | -- | -2.04 | -0.283 | -- | 16.5 | 993 | -- | -- |
| 102.32 | 0.474 | 9.06 | -0.611 | 1.09 | -- | -0.0914 | -- | 0.206 | 0.621 | -- | -- | -- | -- |
| 102.36 | 0.474 | 9.06 | -0.608 | 1.09 | -- | -- | -- | 0.206 | 0.634 | -- | -- | -- | -- |
| 87.3 | 0.435 | 9.13 | -1.23 | -- | 2.3 | -- | -- | -0.165 | -- | 14.9 | 1002 | -- | -- |
| 78.03 | 0.411 | 9.09 | -- | 0.966 | 0.942 | -- | -- | 0.0748 | 0.52 | 21.3 | 1381 | -- | -- |
| 176.56 | 0.621 | 9.04 | -0.569 | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
| 112.1 | 0.495 | 9.05 | -- | 1.08 | -- | -- | -- | 0.274 | 0.607 | -- | -- | -- | -- |
| 120.33 | 0.511 | 9.08 | -- | -- | 1.4 | -- | -- | 0.0593 | -- | 21.73 | 1008 | -- | -- |
| 185.12 | 0.635 | 9.03 | -- | -- | -- | -- | -- | 0.288 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.21 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 2 | 45.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 4 | 45.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 10 | 45.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 15 | 45.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 17 |
| 17 | 45.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 21 | 45.70 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 45 | 45.83 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 58 | 45.91 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 118 | 46.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 157 | 46.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 189 | 46.50 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 227 | 46.68 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 245 | 46.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 246 | 46.75 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 254 | 46.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 347 | 47.09 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 20 |
| 367 | 47.14 | wind | 5 | 43200 | > th | dose dependent | sin | 17 | NA |
| 445 | 47.29 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 17 |
| 545 | 47.46 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 17 |
| 552 | 47.46 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 561 | 47.48 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 690 | 47.60 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 729 | 47.63 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 730 | 47.63 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 741 | 47.64 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 742 | 47.64 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 22 |
| 791 | 47.67 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 800 | 47.68 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 818 | 47.69 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 859 | 47.72 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 890 | 47.75 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 913 | 47.77 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 916 | 47.77 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 942 | 47.79 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 981 | 47.83 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 17 |