Os03g0240900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0240900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.98 | 0.308 | 8.9 | 0.216 | 0.237 | -1.28 | 1.21 | -1.93 | 0.0108 | 2.59 | 27.87 | 6 | -- | -- |
| 46.67 | 0.318 | 8.92 | -0.12 | 0.286 | -1.48 | 0.563 | -- | -0.0164 | 3.81 | 53.87 | 5 | -- | -- |
| 45.91 | 0.318 | 8.91 | 0.0394 | 0.244 | -1.2 | -- | -0.962 | -0.0232 | 4.34 | 27.87 | 6 | -- | -- |
| 47.42 | 0.323 | 8.93 | -0.12 | 0.23 | -1.17 | -- | -- | -0.0615 | 4.44 | 27.87 | 6 | -- | -- |
| 47.98 | 0.324 | 8.91 | 0.0907 | -- | -1.1 | -- | -1.07 | 0.00602 | -- | 25.89 | 10 | -- | -- |
| 66.31 | 0.382 | 8.87 | 0.176 | 0.223 | -- | -0.402 | -- | 0.19 | 11.6 | -- | -- | -- | -- |
| 67.01 | 0.383 | 8.87 | 0.159 | 0.225 | -- | -- | -- | 0.188 | 11.5 | -- | -- | -- | -- |
| 49.67 | 0.33 | 8.93 | -0.0752 | -- | -1.02 | -- | -- | -0.0289 | -- | 27.32 | 6 | -- | -- |
| 47.65 | 0.323 | 8.92 | -- | 0.231 | -1.13 | -- | -- | -0.0332 | 4.51 | 28.44 | 10 | -- | -- |
| 70.18 | 0.391 | 8.88 | 0.153 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 67.67 | 0.385 | 8.88 | -- | 0.223 | -- | -- | -- | 0.17 | 11.5 | -- | -- | -- | -- |
| 49.81 | 0.33 | 8.92 | -- | -- | -0.994 | -- | -- | -0.0164 | -- | 27.36 | 6 | -- | -- |
| 70.8 | 0.393 | 8.88 | -- | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 3 | 40.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 4 | 40.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 5 | 40.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 63 | 42.15 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 70 | 42.65 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 73 | 42.79 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 125 | 43.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 135 | 43.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 137 | 43.78 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 152 | 43.99 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 160 | 44.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 162 | 44.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 163 | 44.07 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 181 | 44.23 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 193 | 44.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 196 | 44.32 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 200 | 44.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 207 | 44.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 209 | 44.41 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 220 | 44.46 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 221 | 44.46 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 280 | 44.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 289 | 44.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 307 | 45.01 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 321 | 45.08 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 331 | 45.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 333 | 45.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 351 | 45.24 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 356 | 45.27 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 468 | 45.66 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 479 | 45.70 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 521 | 45.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 612 | 46.12 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 720 | 46.44 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 746 | 46.53 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 781 | 46.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 801 | 46.67 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 833 | 46.74 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 851 | 46.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 899 | 46.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 900 | 46.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 922 | 46.90 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 926 | 46.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 959 | 46.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 975 | 46.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 2 |