Os03g0233000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF607 family protein.
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Os03g0233000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF607 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 967.21 | 1.46 | 10.3 | -1.42 | 3.1 | 5.19 | -1.58 | -9.05 | -2.1 | 7.35 | 27 | 6071 | 19.7 | -- |
| 1002.04 | 1.47 | 10.1 | 0.96 | 3.27 | 4.52 | -1.72 | -- | -1.78 | 7.67 | 26.5 | 7696 | 19.7 | -- |
| 967.11 | 1.45 | 10.3 | -1.21 | 3.29 | 5.15 | -- | -8.2 | -2.02 | 7.48 | 27 | 6174 | 18.6 | -- |
| 1001.63 | 1.47 | 10 | 1.06 | 3.26 | 4.46 | -- | -- | -1.77 | 7.61 | 26.5 | 7728 | 19.4 | -- |
| 1443.36 | 1.77 | 10.4 | -1.27 | -- | 5.37 | -- | -8.98 | -1.94 | -- | 26.93 | 5899 | 20.9 | -- |
| 1705.58 | 1.94 | 9.65 | 3.45 | 2.97 | -- | -1.36 | -- | 0.0596 | 7.57 | -- | -- | -- | -- |
| 1710.18 | 1.94 | 9.64 | 3.42 | 2.96 | -- | -- | -- | 0.0639 | 7.7 | -- | -- | -- | -- |
| 1486.31 | 1.8 | 10.2 | 0.75 | -- | 4.78 | -- | -- | -1.69 | -- | 26.4 | 7359 | 21 | -- |
| 1026.43 | 1.49 | 10.1 | -- | 3.32 | 4.81 | -- | -- | -1.98 | 7.59 | 26.41 | 7720 | 19 | -- |
| 2183.07 | 2.18 | 9.72 | 3.46 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 2019.13 | 2.1 | 9.73 | -- | 2.99 | -- | -- | -- | -0.317 | 7.62 | -- | -- | -- | -- |
| 1508.54 | 1.81 | 10.2 | -- | -- | 5.15 | -- | -- | -1.87 | -- | 26.4 | 7351 | 20.8 | -- |
| 2499.29 | 2.33 | 9.8 | -- | -- | -- | -- | -- | -0.277 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 870.60 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 2 | 872.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 3 | 873.43 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 11 | 881.94 | humidity | 90.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 14 | 882.72 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 16 | 883.01 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 13 |
| 17 | 883.03 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 23 | 883.75 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 14 | 14 |
| 25 | 883.92 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 28 | 884.28 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 32 | 884.78 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 37 | 885.81 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 18 |
| 52 | 887.71 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 53 | 887.88 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 62 | 888.44 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 65 | 888.80 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 72 | 890.35 | humidity | 90.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 79 | 891.44 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 14 |
| 88 | 892.56 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 95 | 893.27 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 109 | 895.59 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 5 |
| 164 | 902.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 179 | 904.57 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 184 | 904.98 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 191 | 905.58 | humidity | 80.0 | 43200 | > th | dose dependent | no | NA | NA |
| 202 | 906.58 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 296 | 914.47 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 336 | 918.24 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 483 | 932.74 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 490 | 933.26 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 569 | 939.61 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 685 | 949.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 686 | 949.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 720 | 952.55 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 765 | 956.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 781 | 957.31 | humidity | 90.0 | 43200 | > th | dose independent | no | NA | NA |
| 820 | 960.71 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 844 | 962.37 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 4 | NA |
| 880 | 965.25 | humidity | 90.0 | 43200 | < th | dose independent | no | NA | NA |
| 899 | 967.31 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 901 | 967.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 916 | 968.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 917 | 968.67 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 937 | 970.08 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 943 | 970.75 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |