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Os03g0226600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0156) R2 : 0.552
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.936 (0.0398) R2dC : 0.544 R2C : 0.544
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0822 (0.0328) R2dN8 : 0.00798 R2N8 : 0.00881
σ : 0.294
deviance : 39.4
__
_____
C
peak time of C : 4.05
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.63 0.264 11.4 0.0493 0.959 0.956 -0.277 2.37 0.13 3.98 1.125 1433 -- --
34.11 0.272 11.4 0.2 0.965 0.557 -0.263 -- 0.219 3.53 12.14 2697 -- --
31.81 0.263 11.4 0.0513 0.97 0.953 -- 2.38 0.13 3.87 1.11 1420 -- --
32.92 0.267 11.4 0.227 0.958 0.402 -- -- 0.204 3.77 56.13 1325 -- --
35.77 0.279 11.4 0.253 -- 1.55 -- 0.179 0.287 -- 3.706 1966 -- --
37.98 0.289 11.4 0.191 0.934 -- -0.379 -- 0.102 4.05 -- -- -- --
38.39 0.29 11.4 0.195 0.932 -- -- -- 0.104 4.06 -- -- -- --
35.37 0.277 11.4 0.347 -- 1.53 -- -- 0.262 -- 3.143 1957 -- --
34.67 0.274 11.4 -- 0.96 0.37 -- -- 0.175 3.75 57.55 1316 -- --
85.73 0.433 11.4 0.233 -- -- -- -- 0.129 -- -- -- -- --
39.4 0.294 11.4 -- 0.936 -- -- -- 0.0822 4.05 -- -- -- --
37.87 0.287 11.4 -- -- 0.939 -- -- 0.139 -- 2.675 503 -- --
87.16 0.436 11.4 -- -- -- -- -- 0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.65 temperature 25 720 > th dose dependent rect. 15 9
10 28.84 temperature 25 720 > th dose dependent rect. 15 16
20 29.00 temperature 25 720 > th dose dependent sin 13 NA
38 29.40 radiation 1 720 < th dose independent sin 15 NA
57 29.66 radiation 1 720 > th dose independent sin 14 NA
60 29.77 radiation 1 720 < th dose dependent sin 17 NA
63 29.80 radiation 1 720 < th dose independent rect. 16 3
80 29.97 humidity 90 720 < th dose dependent rect. 15 8
82 30.02 radiation 1 720 < th dose independent rect. 16 10
83 30.03 radiation 1 720 > th dose independent rect. 15 15
94 30.12 humidity 70 720 > th dose independent rect. 15 15
122 30.33 humidity 70 720 > th dose independent rect. 15 7
126 30.34 humidity 50 720 > th dose dependent rect. 16 6
130 30.38 humidity 70 720 > th dose independent sin 15 NA
138 30.42 humidity 70 720 > th dose independent sin 13 NA
146 30.45 humidity 70 720 < th dose independent rect. 15 17
147 30.45 radiation 1 720 < th dose dependent rect. 14 12
149 30.46 radiation 1 720 < th dose dependent rect. 7 19
151 30.47 radiation 1 720 < th dose dependent rect. 5 21
152 30.48 humidity 70 720 < th dose independent rect. 15 5
164 30.48 radiation 1 720 < th dose dependent rect. 11 15
166 30.50 humidity 70 720 < th dose independent sin 13 NA
173 30.51 radiation 1 720 < th dose independent rect. 15 15
176 30.51 humidity 90 720 < th dose dependent rect. 15 17
189 30.58 humidity 50 720 > th dose dependent sin 15 NA
199 30.62 radiation 1 720 < th dose dependent rect. 16 3
217 30.65 radiation 1 720 > th dose independent rect. 15 4
255 30.74 radiation 1 720 < th dose independent rect. 4 15
256 30.74 humidity 60 720 > th dose dependent rect. 17 3
265 30.76 radiation 1 720 < th dose independent rect. 5 21
294 30.82 radiation 1 720 < th dose independent rect. 7 19
295 30.82 humidity 90 720 < th dose dependent sin 15 NA
308 30.83 radiation 1 720 < th dose dependent rect. 5 14
333 30.88 radiation 1 720 > th dose dependent rect. 17 13
342 30.91 wind 7 43200 < th dose independent rect. 12 1
356 30.95 wind 7 43200 > th dose independent rect. 12 1
375 30.97 radiation 40 1440 > th dose dependent rect. 13 20
376 30.98 temperature 25 720 > th dose independent rect. 15 9
387 31.00 wind 5 43200 > th dose dependent rect. 12 1
388 31.00 radiation 10 720 < th dose dependent rect. 15 15
395 31.02 radiation 40 1440 > th dose dependent rect. 13 2
443 31.09 radiation 1 720 < th dose independent rect. 15 7
448 31.11 radiation 10 720 > th dose independent rect. 16 2
462 31.11 radiation 1 720 < th dose dependent sin 0 NA
471 31.13 temperature 25 720 < th dose independent rect. 17 5
477 31.14 radiation 1 720 < th dose independent sin 0 NA
497 31.18 radiation 40 1440 > th dose dependent sin 13 NA
505 31.19 radiation 1 720 > th dose independent rect. 13 6
528 31.20 humidity 70 720 > th dose independent rect. 18 10
559 31.23 humidity 50 720 > th dose dependent rect. 14 14
567 31.24 wind 1 43200 < th dose dependent rect. 24 4
594 31.27 temperature 25 720 < th dose independent rect. 19 1
602 31.27 radiation 40 1440 < th dose dependent rect. 16 15
629 31.32 humidity 70 720 > th dose independent rect. 18 2
636 31.33 wind 1 43200 < th dose independent rect. 1 1
665 31.35 wind 7 43200 < th dose independent rect. 10 3
684 31.36 humidity 50 720 > th dose dependent rect. 15 12
687 31.37 temperature 25 720 < th dose independent rect. 17 3
692 31.38 wind 7 43200 > th dose independent rect. 10 3
722 31.42 radiation 40 1440 < th dose dependent rect. 16 5
729 31.43 radiation 40 1440 < th dose dependent rect. 16 7
780 31.47 radiation 40 1440 < th dose dependent rect. 16 11
788 31.48 radiation 40 1440 < th dose dependent rect. 16 2
833 31.50 radiation 10 1440 > th dose dependent rect. 13 19
846 31.52 wind 3 43200 > th dose independent rect. 3 8
913 31.57 wind 3 43200 < th dose independent rect. 3 1
917 31.57 humidity 70 1440 > th dose independent rect. 18 21
920 31.57 radiation 1 1440 > th dose dependent rect. 16 2
927 31.57 radiation 1 1440 < th dose dependent rect. 7 23
951 31.59 temperature 30 720 < th dose independent rect. 17 16
955 31.59 wind 5 43200 > th dose dependent rect. 10 4
972 31.59 humidity 60 1440 < th dose dependent rect. 16 18
983 31.60 temperature 25 14400 > th dose dependent rect. 5 1
995 31.61 temperature 30 720 < th dose independent rect. 16 14
997 31.61 humidity 70 1440 < th dose independent rect. 18 21