BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0226600 Os03g0226600|AK121288
         (1176 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58050.1  | chr3:21492539-21497018 FORWARD LENGTH=1210         650   0.0  
AT2G41960.1  | chr2:17514244-17519015 REVERSE LENGTH=1216         582   e-166

>AT3G58050.1 | chr3:21492539-21497018 FORWARD LENGTH=1210
          Length = 1209

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/527 (61%), Positives = 381/527 (72%), Gaps = 43/527 (8%)

Query: 1   MPGVAAETAVASASGSGIWSRRRDEITLDRLQKFWNGLPPQARQELLKLDKQTLIEQARK 60
           MPG+A           G WS+  D ++ ++LQKFW+ L P+ARQELLK+DKQTL EQARK
Sbjct: 1   MPGLAQRNN--DQYSFGFWSKEIDGVSYNQLQKFWSELSPKARQELLKIDKQTLFEQARK 58

Query: 61  NLYCSRCNGLLLESFMQIVMYGKTLQRDASDINR-LNTTGETRIR-----------QGEQ 108
           N+YCSRCNGLLLE F+QIVM+GK+L  + S  N   N +G ++ +             E 
Sbjct: 59  NMYCSRCNGLLLEGFLQIVMHGKSLHPEGSLGNSPCNKSGGSKYQYDCNAVVSNGCADEM 118

Query: 109 EDPSVHPWGGLVATKDGILTLLDCFVNAKSLRVLQNVFDNARAREREREMLYPDACGGSG 168
           +DPSVHPWGGL  T+DG LTLLDC++ AKSL+ LQNVFD+A ARERERE+LYPDACGG G
Sbjct: 119 QDPSVHPWGGLTTTRDGSLTLLDCYLYAKSLKGLQNVFDSAPARERERELLYPDACGGGG 178

Query: 169 RGWISQRLASYSRGYGTRETCALHTARLSCDTLVDFWSALSEETRLSLLRMKEEDFMERL 228
           RGWISQ +AS+ RG+GTRETCALHTARLSCDTLVDFWSALSE+TR SLLRMKEEDFMERL
Sbjct: 179 RGWISQGIASFGRGHGTRETCALHTARLSCDTLVDFWSALSEDTRQSLLRMKEEDFMERL 238

Query: 229 -----------------------------MRRFESKRFCRDCRRNVIREFKELKELKRMR 259
                                        + +F+SKRFCRDCRRNVIREFKELKELKRMR
Sbjct: 239 RYRICYHSSYHILNCKMNRHFVVWTIQDVLTKFDSKRFCRDCRRNVIREFKELKELKRMR 298

Query: 260 REPRCTSWFCVADTDFQCEVFEDAVIIDWRQTLSEADGSYHHFEWAIGTDEGQSDVFGFE 319
           REPRCT+WFCVA+T FQ EV  D+V  DWR+T SE  G YHHFEWAIG+ EG+ D+  FE
Sbjct: 299 REPRCTTWFCVANTTFQYEVSIDSVKADWRETFSENAGKYHHFEWAIGSGEGKCDILKFE 358

Query: 320 DVGMNVQVHRDGINLDQFEDYFITLRAWKLDGTYTELCVKAHALKGQSCVHHRLVVGNGF 379
           +VGMN +V  +G+NL      +ITLRA+KLDG ++E+  KAHALKGQ+CVH RLVVG+GF
Sbjct: 359 NVGMNGRVQVNGLNLRGLNSCYITLRAYKLDGRWSEVSAKAHALKGQNCVHGRLVVGDGF 418

Query: 380 VTITKGESIRSFFXXXXXXXXXXXXXXXXXXXXXXXXXXLHPQKHAKSPELAREFLLDAA 439
           V+I +GESIR FF                            PQKHAKSPELAREFLLDAA
Sbjct: 419 VSIKRGESIRRFFEHAEEAEEEEDEDMMDKDGNELDGECSRPQKHAKSPELAREFLLDAA 478

Query: 440 AVIFKEQVEKAFREGTARQNAHSIFVSLALELLEERVHVACKEIITL 486
            VIFKEQVEKAFREGTARQNAHSIFV L L+LLE+ +HVACKEIITL
Sbjct: 479 TVIFKEQVEKAFREGTARQNAHSIFVCLTLKLLEQHLHVACKEIITL 525



>AT2G41960.1 | chr2:17514244-17519015 REVERSE LENGTH=1216
          Length = 1215

 Score =  582 bits (1501), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 290/491 (59%), Positives = 350/491 (71%), Gaps = 10/491 (2%)

Query: 1   MPGVAAETAVASASGSGIWSRRRDEITLDRLQKFWNGLPPQARQELLKLDKQTLIEQARK 60
           MPG+         S SG WS   D +T D+L +FW+ L  +AR ELL++DKQTL EQARK
Sbjct: 9   MPGLTTHMN-EHYSSSGFWSEDDDGLTYDQLDQFWSELSSKARHELLRIDKQTLFEQARK 67

Query: 61  NLYCSRCNGLLLESFMQIV-----MYGKTLQRDASDINRLNTTGETRIRQGEQEDPSVHP 115
           N+ CSRC GLLLE F QI+      Y K +   + D  + N T +  +     + P VH 
Sbjct: 68  NMCCSRCLGLLLEGFAQILSAGRAAYEKRMMGPSKDNCKSNGTRKCTV---AYQSPPVHR 124

Query: 116 WGGLVATKDGILTLLDCFVNAKSLRVLQNVFDNARAREREREMLYPDACGGSGRGWISQR 175
           WGGL  T+ G +TLLDCF+ AK+ + LQNVF++ RARERERE+LYPDACGG GR W+SQ 
Sbjct: 125 WGGLTTTRSGCITLLDCFLTAKTFKGLQNVFESNRARERERELLYPDACGGGGRVWLSQG 184

Query: 176 LASYSRGYGTRETCALHTARLSCDTLVDFWSALSEETRLSLLRMKEEDFMERLMRRFESK 235
           +A + +G+GTRETC LHT RLSCDTLVDFWSAL E +R SLLRMKEEDF+ERL  RF+ K
Sbjct: 185 IAGFGKGHGTRETCNLHTTRLSCDTLVDFWSALEEHSRQSLLRMKEEDFVERLTYRFDCK 244

Query: 236 RFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTDFQCEVFEDAVIIDWRQTLSEA 295
           +FCRDCRRNVIREFKELKELKR++R+PRCT WFCVADT FQ EV  D+V  DW Q  +E 
Sbjct: 245 KFCRDCRRNVIREFKELKELKRIQRDPRCTDWFCVADTAFQYEVDIDSVRADWSQYFTEN 304

Query: 296 DGSYHHFEWAIGTDEGQSDVFGFEDVGMNVQVHRDGINLDQFEDYFITLRAWKLDGTYTE 355
            G YHHFEWAIGT EG+SD+  F+ VG +     +G++L    + +ITLRA+K +G  +E
Sbjct: 305 AG-YHHFEWAIGTGEGESDILEFKYVGNDRSARVNGLDLRGLHECYITLRAFKKNGRPSE 363

Query: 356 LCVKAHALKGQSCVHHRLVVGNGFVTITKGESIRSFFXXXXXXXXXXXXXXXXXXXXXXX 415
           + VKAHAL+GQ CVH RLVVG+GFV+I +GE IR FF                       
Sbjct: 364 ISVKAHALRGQQCVHSRLVVGDGFVSIKRGECIRMFFEHAEEAEEEEDEVLIDKDGNELD 423

Query: 416 XXXLHPQKHAKSPELAREFLLDAAAVIFKEQVEKAFREGTARQNAHSIFVSLALELLEER 475
              L PQKHAKSPELAREFLLDAA VIFKEQVEKAFR+GTARQNAHSIFV L+ ELLE+R
Sbjct: 424 GECLRPQKHAKSPELAREFLLDAATVIFKEQVEKAFRDGTARQNAHSIFVCLSSELLEQR 483

Query: 476 VHVACKEIITL 486
           VH+ACKEI+TL
Sbjct: 484 VHIACKEIVTL 494




 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 34/228 (14%)

Query: 967  QLLHHQSMHVPT-HSSATMGL-HNHP--WA-APASGYMQYAQPSHF-YSNPLGFGVPGKQ 1020
            Q+L+ QS+ +P   + +TMG  H  P  W+ A  +G MQ+  P+H+ Y+ PLG+ + G +
Sbjct: 1002 QMLN-QSIPLPVFQAPSTMGYYHQAPVSWSSASTNGLMQFPHPNHYVYTGPLGYSLNG-E 1059

Query: 1021 SPDFPVQYSN-VHHFPAPAFSYAPPEPIRKTTPSFRVMHTSPPYRNGLHQSQTVGHPHGD 1079
            SP   +QY   ++H  AP F+  P  PI         M+T       + Q+Q +      
Sbjct: 1060 SP-LCMQYGTPLNHSAAPFFNSGPV-PIFHPFAETNTMNT-------VDQAQPLEPLEHS 1110

Query: 1080 PTLERHPSQPKPLDLKDAPGENKSSPEGNASFSLFQFNLPIA-----PPAPPSSKDDT-- 1132
               E +  +   + L + P +     + + +FSLF F  P+A        P  SKD    
Sbjct: 1111 FLKEANERRFNEMPLMETPRKRCPQTDSDENFSLFHFGGPVALSTGSKANPARSKDGILE 1170

Query: 1133 ------SGESATRTPLAQVQVQPCSREQTDVKEYNLFCSKNGSMFSFI 1174
                  SG+     P    + +   +E T  +EYNLF + N   FS  
Sbjct: 1171 DFSLQFSGDHVFGDPTGNSKKE---KENTVGEEYNLFATSNSLRFSIF 1215



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.132    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 24,455,412
Number of extensions: 1067389
Number of successful extensions: 3534
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3537
Number of HSP's successfully gapped: 3
Length of query: 1176
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1066
Effective length of database: 8,090,809
Effective search space: 8624802394
Effective search space used: 8624802394
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)