Os03g0226200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Non-symbiotic hemoglobin 2 (rHb2) (ORYsa GLB1b).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0226200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Non-symbiotic hemoglobin 2 (rHb2) (ORYsa GLB1b).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 431.58 | 0.976 | 3.76 | -1.81 | 0.949 | 28.9 | -0.709 | -102 | -0.467 | 22.6 | 0.08959 | 266 | 1.98 | 2 |
| 582.27 | 1.13 | 3.65 | -1.49 | 0.895 | -0.438 | -1.54 | -- | -0.596 | 0.428 | 2.165e-05 | 32 | 3.75 | 13.7 |
| 433.35 | 0.97 | 3.76 | -1.77 | 0.964 | 29 | -- | -102 | -0.466 | 22.3 | 0.1152 | 263 | 1.98 | 2 |
| 586.53 | 1.14 | 3.64 | -1.42 | 0.579 | -0.308 | -- | -- | -0.577 | 23.3 | -0.04916 | 4 | 4.03 | 14.3 |
| 489.57 | 1.03 | 3.73 | -1.76 | -- | 28.5 | -- | -101 | -0.461 | -- | 0.1171 | 265 | 1.98 | 2.01 |
| 582.46 | 1.13 | 3.64 | -1.49 | 0.893 | -- | -1.55 | -- | -0.595 | 0.432 | -- | -- | -- | -- |
| 589.12 | 1.14 | 3.65 | -1.43 | 0.932 | -- | -- | -- | -0.582 | 23.3 | -- | -- | -- | -- |
| 591.78 | 1.14 | 3.62 | -1.4 | -- | -0.688 | -- | -- | -0.571 | -- | -0.04916 | 4 | 4.03 | 14.3 |
| 638.74 | 1.18 | 3.6 | -- | 0.501 | -0.35 | -- | -- | -0.431 | 23.1 | -0.08956 | 2 | 4.08 | 14.9 |
| 643.45 | 1.19 | 3.62 | -1.4 | -- | -- | -- | -- | -0.573 | -- | -- | -- | -- | -- |
| 642.74 | 1.19 | 3.61 | -- | 0.917 | -- | -- | -- | -0.423 | 23.2 | -- | -- | -- | -- |
| 642.74 | 1.18 | 3.59 | -- | -- | -0.697 | -- | -- | -0.422 | -- | -0.1115 | 4 | 4.08 | 14.9 |
| 695.35 | 1.23 | 3.59 | -- | -- | -- | -- | -- | -0.417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 433.25 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 2 | 433.28 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 3 | 433.53 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 4 | 433.53 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 448.34 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 14 | 454.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 15 | 455.00 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 16 | 455.00 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 22 | 455.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 24 | 455.33 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 28 | 456.38 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 74 | 466.46 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 76 | 468.88 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 77 | 469.08 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 98 | 479.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 100 | 479.42 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 102 | 479.42 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 104 | 479.42 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 155 | 479.42 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 157 | 479.42 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 159 | 479.42 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 213 | 480.01 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 249 | 484.66 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 251 | 485.14 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 258 | 485.53 | wind | 1.0 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 262 | 486.47 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 263 | 486.52 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 267 | 486.77 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 274 | 487.49 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 278 | 487.91 | atmosphere | 1010.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 281 | 488.04 | wind | 7.0 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 293 | 488.65 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 323 | 490.81 | wind | 3.0 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 330 | 491.27 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 392 | 492.97 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 399 | 493.21 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 407 | 493.57 | wind | 5.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 446 | 495.47 | precipitation | 0.1 | 30 | < th | dose independent | sin | 4 | NA |
| 447 | 495.47 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 4 | NA |
| 516 | 497.92 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 518 | 497.97 | wind | 3.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 531 | 498.65 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 5 |
| 553 | 498.67 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 557 | 498.67 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 5 |
| 570 | 498.68 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 595 | 499.23 | wind | 5.0 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 599 | 499.27 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 601 | 499.30 | wind | 3.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 642 | 500.59 | wind | 5.0 | 720 | > th | dose independent | rect. | 17 | 6 |
| 652 | 500.94 | wind | 3.0 | 270 | < th | dose independent | rect. | 18 | 2 |
| 664 | 501.25 | wind | 3.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 740 | 503.07 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 753 | 503.33 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 786 | 504.04 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 9 |
| 795 | 504.25 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 812 | 504.65 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 819 | 504.80 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 828 | 504.93 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 839 | 504.99 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 853 | 505.10 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 917 | 505.96 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 1 |
| 933 | 506.23 | wind | 3.0 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 965 | 506.64 | wind | 5.0 | 720 | > th | dose independent | rect. | 16 | 12 |